Protein Overview: OPN4_RAT

General Information:
Name(s) found:	OPN4_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|81915044\|sp\|Q8R456.1\|OPN4_RAT RecName: Full=Melanopsin; AltName: Full=Opsin-4 [NCBI NR] gi\|20302016\|ref\|NP_620215.1\| opsin 4 [Rattus norvegicus] [NCBI NR] gi\|20148228\|gb\|AAL61854.1\| melanopsin [Rattus norvegicus] [NCBI NR] gi\|149034097\|gb\|EDL88867.1\| opsin 4 (melanopsin), isoform CRA_b [Rattus norvegicus] [NCBI NR] Melanopsin OS=Rattus norvegicus GN=Opn4 PE=2 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):16-10313306 Melanopsin [hmr_yeast5_DM3-1_pombe.fasta] opsin 4 (melanopsin) [HMR_022704-rand.fasta] opsin 4 (melanopsin) [Rattus norvegicus]gi\|20148228\|gb\|AAL61854.1\| melanopsin [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Melanopsin [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] (NM_138860) opsin 4 (melanopsin) [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] Melanopsin (Opsin-4) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] opsin 4 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] opsin 4 (melanopsin), isoform CRA_b [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] melanopsin [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 MELANOPSIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Opn4 Melanopsin [rat-ipi-250309-contam.fasta] Melanopsin OS=Rattus norvegicus GN=Opn4 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	474 amino acids
Gene Ontology:
Cellular Component:	membrane [IEA] integral to membrane [TAS]
Biological Process:	G-protein coupled receptor protein signaling pathway [IEA] protein-chromophore linkage [IEA] visual perception [IEA] regulation of circadian rhythm [ISS] phototransduction [UNKNOWN][IDA] response to stimulus [IEA]
Molecular Function:	11-cis retinal binding [UNKNOWN][ISS] G-protein coupled photoreceptor activity [UNKNOWN][IDA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSPSESRVP SSLTQDPSFT ASPALLQGIW NSTQNISVRV QLLSVSPTTP GLQAAAWVPF  60
   61 PTVDVPDHAH YTLGTVILLV GLTGMLGNLT VIYTFCRNRG LRTPANMLII NLAVSDFLMS 120
  121 FTQAPVFFAS SLYKKWLFGE TGCKFYAFCG AVFGIVSMIT LTAIAMDRYL VITRPLATIG 180
  181 MRSKRRTALV LLGVWLYALA WSLPPFFGWS AYVPEGLLTS CSWDYVTFTP LVRAYTMLLF 240
  241 CFVFFLPLLI IIFCYIFIFR AIRETGRACE GCGESPLRRR QWQRLQSEWK MAKVALIVIL 300
  301 LFVLSWAPYS TVALVGFAGY SHILTPYMSS VPAVIAKASA IHNPIIYAIT HPKYRAAIAQ 360
  361 HLPCLGVLLG VSGQRSHPSL SYRSTHRSTL SSQSSDLSWI SGQKRQESLG SESEVGWTDT 420
  421 ETTAAWGAAQ QASGQSFCSH DLEDGEVKAP SSPQEQKSKT PKTKRHLPSL DRRM

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein Overview: OPN4_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: