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Protein Overview: UBP1_RAT

General Information:
Name(s) found: UBP1_RAT [Swiss-Prot]
Description(s) found:
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  • gi|81882381|sp|Q569C3.1|UBP1_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 1; AltName: Full=Ubiquitin thioesterase 1; AltName: Full=Ubiquitin-specific-processing protease 1; AltName: Full=Deubiquitinating enzyme 1 [NCBI NR]
  • gi|62543525|ref|NP_001015015.1| ubiquitin specific peptidase 1 [Rattus norvegicus] [NCBI NR]
  • gi|62205059|gb|AAH92574.1| Ubiquitin specific peptidase 1 [Rattus norvegicus] [NCBI NR]
  • ref|XP_233217.2| similar to Ubiquitin carboxyl-terminal hydrolase 1 (Ubiquitin thiolesterase 1) (Ubiquitin-specific processing protease 1) (Deubiquitinating enzyme 1) (hUBP) [Rattus norvegicus] [NCBI NR]
  • gi|149044544|gb|EDL97803.1| ubiquitin specific peptdiase 1, isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • Ubiquitin carboxyl-terminal hydrolase 1 OS=Rattus norvegicus GN=Usp1 PE=1 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):5-136989610 [hmr_yeast5_DM3-1_pombe.fasta]
  • similar to Ubiquitin carboxyl-terminal hydrolase 1 (Ubiquitin thiolesterase 1) (Ubiquitin-specific processing protease 1) (Deubiquitinating enzyme 1) (hUBP) [HMR_022704-rand.fasta]
  • similar to Ubiquitin carboxyl-terminal hydrolase 1 (Ubiquitin thiolesterase 1) (Ubiquitin-specific processing protease 1) (Deubiquitinating enzyme 1) (hUBP) [Rattus norvegicus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 Ubiquitin specific protease 1 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Tax_Id=10116 Similar to Ubiquitin carboxyl-terminal hydrolaSe 1 (Ubiquitin thioleSteraSe 1) (Ubiquitin-Specific proceSSing proteaSe 1) (Deubiquitinating enzyme 1) (hUBP) [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta]
  • Ubiquitin carboxyl-terminal hydrolase 1 (Ubiquitin thioesterase 1) (Ubiquitin-specific-processing protease 1) (Deubiquitinating enzyme 1) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • ubiquitin specific peptdiase 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • ubiquitin specific peptdiase 1, isoform CRA_a [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Ubiquitin specific peptdiase 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 SIMILAR TO UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 1 (UBIQUITIN THIOLESTERASE 1) (UBIQUITIN-SPECIFIC PROCESSING PROTEASE 1) (DEUBIQUITINATING ENZYME 1) (HUBP) [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • ubiquitin specific peptidase 1 [Rattus norvegicus] [NCBI-RefSeq_human-rat_na_04-07-2009_con_reversed.fasta]
  • Tax_Id=10116 Gene_Symbol=Usp1 Ubiquitin carboxyl-terminal hydrolase 1 [rat-ipi-250309-contam.fasta]
  • Ubiquitin carboxyl-terminal hydrolase 1 OS=Rattus norvegicus GN=Usp1 [011711_HMR.fasta]
  • Ubiquitin carboxyl-terminal hydrolase 1 OS=Rattus norvegicus GN=Usp1 PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
    • Organism: Rattus norvegicus
    Length: 784 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN][ISS]
    nucleoplasm [UNKNOWN]
    Biological Process: protein deubiquitination [UNKNOWN][ISS]
    regulation of DNA repair [UNKNOWN][ISS]
    response to UV [UNKNOWN][ISS]
    ubiquitin-dependent protein catabolic process [IEA]
    Molecular Function: ubiquitin-specific protease activity [UNKNOWN][ISS]
    protein binding [UNKNOWN][IEA]
    ubiquitin thiolesterase activity [UNKNOWN][ISS]
    cysteine-type peptidase activity [IEA]
    peptidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGVIPSESN GLSRGSPSKK NRLSLKFFQK KETKRALDFT DSQEDEEKAS EYRGSEIDQV  60
   61 VPAAQSSPVS CEKRENLLPF VGLNNLGNTC YLNSILQVLY FCPGFKAGVK HLFNIISRKK 120
  121 EALKDDSIQK DKGSCKEDPL ASYELICSLQ SLIISVEQLQ ASFLLNPEKY TDELATQPRR 180
  181 LLNTLRELNP MYEGYLQHDA QEVLQCILGN IQETCQLLKK EEIKNLTEFS SKVEEKSLQK 240
  241 EETGGISSTE TDSTRNLDDL KEQLPKGNWK RKSDGESGNM KKKVKLSRES QPLEENQRQT 300
  301 RSKRKATGDT LEASPKIIPK CVSENESAKP SQKKSKVKIN WLKPATKQPS ILSKFCSLGK 360
  361 ITTNQRSKGQ PKVNEGDLEE DLEKDGRDNT VNGSGPASPG SSVTPVDSSE AKSINKGAEQ 420
  421 IGFELVEKLF QGQLVLRTRC LECESLTERR EDFQDISVPV QEDELSKVEE SSEISPEPKT 480
  481 EMKTLRWAIS QFASVERIVG EDKYFCENCH HYTEAERSLL FDKMPEVITI HLKCFAASGL 540
  541 EFDCYGGGLS KINTPLLTPL KLSLEEWSTK PTNDSYGLFA VVMHSGITIS SGHYTASVKV 600
  601 TDLNSLELDK GNFVVDQMCE IGKPEPLNEE EARGTAENYD DEVSIRVGGN AQPSKVLNKK 660
  661 NVEGIGLLGG QKSKADYELC SKASNPEKVV GTPFTDSRNS ETNDTNGTQE SDRSKESSDQ 720
  721 TGINVSGLEN KISYVVQSLK EYEGKWLLFD DSEVKVTEEK DFLNSLSPST SPTSTPYLLF 780
  781 YKKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle