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Protein Overview: RS16_RAT

General Information:
Name(s) found: RS16_RAT [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • 40S ribosomal protein S16 OS=Rattus norvegicus GN=Rps16 PE=1 SV=2 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 146 amino acids

    Gene Ontology:
    Cellular Component: cytosolic small ribosomal subunit [UNKNOWN][IDA]
    cytosol [UNKNOWN]
    small ribosomal subunit [UNKNOWN][ISS]
    ribosome [IEA]
    intracellular [IEA]
    Biological Process: biological_process [ND]
    ribosomal small subunit biogenesis [UNKNOWN]
    rRNA processing [UNKNOWN]
    translational elongation [UNKNOWN]
    translation [IEA]
    Molecular Function: RNA binding [UNKNOWN][TAS]
    protein binding [UNKNOWN]
    structural constituent of ribosome [IEA]
    molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSKGPLQSV QVFGRKKTAT AVAHCKRGNG LIKVNGRPLE MIEPRTLQYK LLEPVLLLGK  60
   61 ERFAGVDIRV RVKGGGHVAQ IYAIRQSISK ALVAYYQKYV DEASKKEIKD ILIQYDRTLL 120
  121 VADPRRCESK KFGGPGARAR YQKSYR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] PSI-BLAST 49.30103 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1H, Contains 40S subunit. The 60S Ribosomal Subunit Is In File 1S1I.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle