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Protein Overview: PDE1B_RAT

General Information:
Name(s) found: PDE1B_RAT [Swiss-Prot]
Description(s) found:
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  • pir||A44161 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) 1B, calmodulin-dependent, 63K splice form - rat [NCBI NR]
  • gi|231819|sp|Q01066.1|PDE1B_RAT RecName: Full=Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B; Short=Cam-PDE 1B; AltName: Full=63 kDa Cam-PDE [NCBI NR]
  • gi|203269|gb|AAA16530.1| cyclic nucleotide phosphodiesterase [Rattus norvegicus] [NCBI NR]
  • gi|149031868|gb|EDL86780.1| phosphodiesterase 1B, Ca2+calmodulin dependent, isoform CRA_b [Rattus norvegicus] [NCBI NR]
  • gi|13195526|gb|AAK15740.1|AF327906_1 phosphodiesterase 1B [Rattus norvegicus] [NCBI NR]
  • gi|12083681|ref|NP_073201.1| phosphodiesterase 1B [Rattus norvegicus] [NCBI NR]
  • Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B OS=Rattus norvegicus GN=Pde1b PE=1 SV=1 [Swiss-Prot]
  • (Q01066) Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B (EC 3.1.4.17) (Cam-PDE 1B) (63 kDa Cam-PDE) [Swiss-Prot]
  • Ensembl_locations(Chr-bp):7-132970388 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B [hmr_yeast5_DM3-1_pombe.fasta]
  • phosphodiesterase 1B; phosphodiesterase 1B1, Ca2+-calmodulin dependent, 63 kDa; cyclic nucleotide phosphodiesterase (CaM-PDE); phosphodiesterase IB calmodulin-dependent; phosphodiesterase 1B1 Ca2+-calmodulin dependent 63 kDa; anti-oxidant protein 2 [HMR_022704-rand.fasta]
  • phosphodiesterase 1B; cyclic nucleotide phosphodiesterase (CaM-PDE); phosphodiesterase IB calmodulin-dependent; phosphodiesterase 1B1 Ca2+-calmodulin dependent 63 kDa; anti-oxidant protein 2; phosphodiesterase 1B1, Ca2+-calmodulin dependent, 63 kDa [071204_hmrz_cont.fasta]
  • phosphodiesterase 1B [Rattus norvegicus]gi|231819|sp|Q01066|CN1B_RAT Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B (Cam-PDE 1B) (63 kDa Cam-PDE)gi|348344|pir||A44161 3',5'-cyclic-nucleotide phosphodiesterase (EC 3.1.4.17) 1B, [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • (NM_022710) cyclic nucleotide phosphodiesterase (CaM-PDE); anti-oxidant protein 2; phosphodiesterase 1B1, Ca2+-calmodulin dependent, 63 kDa [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B (Cam-PDE 1B) (63 kDa Cam-PDE) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • phosphodiesterase 1B [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • phosphodiesterase 1B, Ca2+calmodulin dependent, isoform CRA_b [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • cyclic nucleotide phosphodiesterase [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 CALCIUM/CALMODULIN-DEPENDENT 3',5'-CYCLIC NUCLEOTIDE PHOSPHODIESTERASE 1B [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10116 Gene_Symbol=Pde1b Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B [rat-ipi-250309-contam.fasta]
  • Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B OS=Rattus norvegicus GN=Pde1b [011711_HMR.fasta]
  • Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B OS=Rattus norvegicus GN=Pde1b PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
    • Organism: Rattus norvegicus
    Length: 535 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEA]
    cytosol [UNKNOWN]
    neuronal cell body [IDA]
    Biological Process: locomotory behavior [UNKNOWN][IEA]
    signal transduction [UNKNOWN][IEA]
    cGMP catabolic process [IDA]
    cAMP catabolic process [IDA]
    visual learning [UNKNOWN][IEA]
    Molecular Function: calmodulin binding [IEA]
    metal ion binding [IEA]
    calcium- and calmodulin-regulated 3',5'-cyclic-GMP phosphodiesterase activity [IDA]
    cyclic-nucleotide phosphodiesterase activity [IDA]
    3',5'-cyclic-AMP phosphodiesterase activity [IDA]
    hydrolase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSPRSPPE MLESDCPSPL ELKSAPSKKM WIKLRSLLRY MVKQLENGEV NIEELKKNLE  60
   61 YTASLLEAVY IDETRQILDT EDELRELRSD AVPSEVRDWL ASTFTQQTRA KGRRAEEKPK 120
  121 FRSIVHAVQA GIFVERMFRR TYTAVGPTYS TAVHNCLKNL DVWCFDVFSL NRAADDHALR 180
  181 TIVFELLTRH SLISRFKIPT VFLMSFLEAL ETGYGKYKNP YHNQIHAADV TQTVHCFLLR 240
  241 TGMVHCLSEI EVLAIIFAAA IHDYEHTGTT NSFHIQTKSE CAILYNDRSV LENHHISSVF 300
  301 RMMQDDEMNI FINLTKDEFV ELRALVIEMV LATDMSCHFQ QVKTMKTALQ QLERIDKSKA 360
  361 LSLLLHAADI SHPTKQWSVH SRWTKALMEE FFRQGDKEAE LGLPFSPLCD RTSTLVAQSQ 420
  421 IGFIDFIVEP TFSVLTDVAE KSVQPLTDDD SKSKSQPSFQ WRQPSLDVDV GDPNPDVVSF 480
  481 RSTWTKYIQE NKQKWKERAA SGITNQMSID ELSPCEEEAP SSPAEDEHNQ NGNLD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle