Protein Overview: gi|125526428

General Information:
Name(s) found:	gi\|125526428 [NCBI NR]
Description(s) found:	gi\|125526428\|gb\|EAY74542.1\| hypothetical protein OsI_02435 [Oryza sativa Indica Group] [NCBI NR]
Organism:	Oryza sativa Indica Group
Length:	221 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVFEGYER QYCEISASLA RKCTAASALQ GEKLKQKASE IKSGIDGAEA LIKKMDLEAR  60
   61 NQQPSVRAGL LAKLREYKSD LNNLKGTLKR VTTGNAQQGS REELLESGMA ETLGVSADQK 120
  121 SRLLRITEKQ NKTTDRIRDS HRTMLETEDL GVSLLQDLHQ QRERLIHAHG TLDNVDDNIG 180
  181 KSRRIMGAMV RRMDRNKWII GFIIALLVLV ILVILYFKFV H

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..221]	PSI-BLAST	15.0	Syntaxin 1A N-terminal domain

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
phosphatidic acid binding	5.99692791841048	bayes_pls_golite062009
SNAP receptor activity	3.50393203740159	bayes_pls_golite062009
calcium channel inhibitor activity	2.99240433552966	bayes_pls_golite062009
protein transporter activity	2.96543140800925	bayes_pls_golite062009
arachidonic acid binding	2.43181217934756	bayes_pls_golite062009
binding	2.18404492932496	bayes_pls_golite062009
SNARE binding	1.85060343142976	bayes_pls_golite062009
protein binding	1.82422117934251	bayes_pls_golite062009
transporter activity	1.74189664015129	bayes_pls_golite062009
substrate-specific transporter activity	1.49085442233849	bayes_pls_golite062009
transmembrane transporter activity	1.13101548288086	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	0.643064875848901	bayes_pls_golite062009
ion transmembrane transporter activity	0.370484918396857	bayes_pls_golite062009
channel activity	0.0647076360772156	bayes_pls_golite062009
passive transmembrane transporter activity	0.0647076360772156	bayes_pls_golite062009
substrate-specific channel activity	0.0435980899803177	bayes_pls_golite062009
phospholipid binding	0.0172309833091902	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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