YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|125526428
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVFEGYER QYCEISASLA RKCTAASALQ GEKLKQKASE IKSGIDGAEA LIKKMDLEAR  60
   61 NQQPSVRAGL LAKLREYKSD LNNLKGTLKR VTTGNAQQGS REELLESGMA ETLGVSADQK 120
  121 SRLLRITEKQ NKTTDRIRDS HRTMLETEDL GVSLLQDLHQ QRERLIHAHG TLDNVDDNIG 180
  181 KSRRIMGAMV RRMDRNKWII GFIIALLVLV ILVILYFKFV H

Type	Start	End	Confidence
Cytoplasmic	1	197	0.98
Transmembrane Helix	198	219	0.93
Non-Cytoplasmic	220	221	0.84