Protein Overview: TF2AA_RAT

General Information:
Name(s) found:	TF2AA_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|67461589\|sp\|O08949.1\|TF2AA_RAT RecName: Full=Transcription initiation factor IIA subunit 1; AltName: Full=General transcription factor IIA subunit 1; Contains: RecName: Full=Transcription initiation factor IIA alpha chain; AltName: Full=TFIIA p35 subun [NCBI NR] gi\|2149996\|gb\|AAB58716.1\| TFIIA large subunit [Rattus norvegicus] [NCBI NR] gi\|149025305\|gb\|EDL81672.1\| general transcription factor 2a, 1 [Rattus norvegicus] [NCBI NR] gi\|11559984\|ref\|NP_071544.1\| general transcription factor IIa precursor [Rattus norvegicus] [NCBI NR] Transcription initiation factor IIA subunit 1 OS=Rattus norvegicus GN=Gtf2a1 PE=1 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):6-111091443;6-111091443 TFIIA large subunit [hmr_yeast5_DM3-1_pombe.fasta] general transcription factor IIa precursor; general transcription factor IIa, 1 (37kD and 19kD subunits); TFIIA large subunit; general transcription factor 2a 1; general transcription factor IIa 1 (37kD and 19kD subunits) [HMR_022704-rand.fasta] general transcription factor IIa precursor; TFIIA large subunit; general transcription factor 2a 1; general transcription factor IIa 1 (37kD and 19kD subunits); general transcription factor IIa, 1 (37kD and 19kD subunits) [071204_hmrz_cont.fasta] general transcription factor IIa precursor [Rattus norvegicus]gi\|2149996\|gb\|AAB58716.1\| TFIIA large subunit [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Transcription initiation factor IIA subunit 1 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] (NM_022208) general transcription factor IIa precursor; general transcription factor IIa, 1 (37kD and 19kD subunits); TFIIA large subunit [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] Tax_Id=10116 TFIIA large subunit [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta] general transcription factor IIa precursor [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Transcription initiation factor IIA subunit 1 (General transcription factor IIA subunit 1) [Contains: Transcription initiation factor IIA alpha chain (TFIIA p35 subunit); Transcription initiation factor IIA beta chain (TFIIA p19 subunit)] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] general transcription factor 2a, 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] TFIIA large subunit [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 TFIIA LARGE SUBUNIT [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Transcription initiation factor IIA subunit 1 (General transcription factor IIA1) [Contains: Transcription initiation factor IIA alpha chain (TFIIA p35 subunit); Transcription initiation factor IIA beta chain (TFIIA p19 subunit)] [nr-271106-contam.fasta] Tax_Id=10116 Gene_Symbol=Gtf2a1 Transcription initiation factor IIA subunit 1 [rat-ipi-250309-contam.fasta] general transcription factor IIA, 1 precursor [Rattus norvegicus] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta] Transcription initiation factor IIA subunit 1 OS=Rattus norvegicus GN=Gtf2a1 [011711_HMR.fasta] Transcription initiation factor IIA subunit 1 OS=Rattus norvegicus GN=Gtf2a1 PE=2 SV=1 [UNIPROT_RAT_07-21-2011_reversed.fasta]
Organism:	Rattus norvegicus
Length:	377 amino acids
Gene Ontology:
Cellular Component:	nucleus [UNKNOWN][IEA] cytoplasm [UNKNOWN][IEA] transcription factor TFIIA complex [UNKNOWN][IEA] [NOT]nucleolus [UNKNOWN] nucleoplasm [UNKNOWN]
Biological Process:	general transcription from RNA polymerase II promoter [UNKNOWN][IEA] regulation of transcription [IEA] transcription initiation from RNA polymerase II promoter [UNKNOWN][IEA] RNA elongation from RNA polymerase II promoter [UNKNOWN]
Molecular Function:	DNA binding [UNKNOWN][IEA] protein binding [UNKNOWN] RNA polymerase II transcription factor activity [IEA] protein heterodimerization activity [UNKNOWN][IEA] general RNA polymerase II transcription factor activity [UNKNOWN][IEA] transcription factor binding [UNKNOWN][IEA] TATA-binding protein binding [UNKNOWN][IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANSANTNTV PKLYRSVIED VINDVRDIFL DDGVDEQVLM ELKTLWENKL MQSRAVDGFH  60
   61 SEEQQLLLQV QQQHQPQQQQ HHHHHHHQQA QPQQTVPQQA QTQQVLIPAS QQATAPQVIV 120
  121 PDSKLIQHMN ASSITSAAAT AATLALPAGV TPVQQILTNS GQLLQVVRAA NGAQYIFQPQ 180
  181 QSVVLQQQVI PQMQPGGVQA PVIQQVLAPL PGGISPQTGV IIQPQQILFT GNKTQVIPTT 240
  241 VAAPTPAQAQ IPAAGQQQPQ AQPAQQQAPL VLQVDGTGDT SSEEDEDEEE DYDDDEEEDK 300
  301 EKDGAEDGQV EEEPLNSEDD VSDEEGQELF DTENVVVCQY DKIHRSKNKW KFHLKDGIMN 360
  361 LNGRDYIFSK AIGDAEW

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.74

Protein Overview: TF2AA_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: