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Protein Overview: gi|120603303, gi...

General Information:
Name(s) found: gi|120603303 [NCBI NR]
gi|120563532 [NCBI NR]
Description(s) found:
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  • gi|120603303|ref|YP_967703.1| signal peptidase I [Desulfovibrio vulgaris subsp. vulgaris DP4] [NCBI NR]
  • gi|120563532|gb|ABM29276.1| signal peptidase I. Serine peptidase. MEROPS family S26A [Desulfovibrio vulgaris subsp. vulgaris DP4] [NCBI NR]
  • Peptidase S26A, signal peptidase I [Desulfovibrio vulgaris subsp. vulgaris DP4] [nr-271106-contam.fasta]
    • Organism: Desulfovibrio vulgaris DP4
    Length: 199 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQKNLLLEY IEALLVAFVL AMFIRTFVVQ AYKIPSGSML ETLQIGDHLL VNKFLYGVKI  60
   61 PFTHEYMIKG KDPKRGDIIV FEYPNNPSID YIKRIVGVPG DVIEVRDKQL YRNGEKVEES 120
  121 YIRHSEGDVV QPGVRDNYGP VTVPEGKYFA MGDNRDDSQD SRFWGFVDRT AIHGRAWIIY 180
  181 WSWEGLGNVR WERVGNVLH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..199] PSI-BLAST 43.0 Crystal structure of Escherichia coli type I signal peptidase in complex with a lipopeptide inhibitor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidase activity
    		•  0.485843348899278 bayes_pls_golite062009
  • catalytic activity
    		•  0.415601732277814 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.237734983138449 bayes_pls_golite062009
  • hydrolase activity
    		•  0.188292586303013 bayes_pls_golite062009
  • protein binding
    		•  0.0579980138351139 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle