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Protein Overview: gi|126509176, gi...

General Information:
Name(s) found: gi|153820285 [NCBI NR]
gi|126509176 [NCBI NR]
Description(s) found:
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  • gi|153820285|ref|ZP_01972952.1| septum site-determining protein MinD [Vibrio cholerae NCTC 8457] [NCBI NR]
  • gi|126509176|gb|EAZ71770.1| septum site-determining protein MinD [Vibrio cholerae NCTC 8457] [NCBI NR]
    • Organism: Vibrio cholerae NCTC 8457
    Length: 276 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGKNNMSRI IVVTSGKGGV GKTTSSAAIA SGLALRGKKT AVIDFDIGLR NLDLIMGCER  60
   61 RVVYDFVNVI NGEATLNQAL IKDKRNENLF ILPASQTRDK DALTKDGVQR VLNDLKEMGF 120
  121 DFIICDSPAG IEQGALMALY YADEAIVTTN PEVSSVRDSD RILGILDSKS MRAEQGQAPI 180
  181 KQHLLLTRYN PARVTQGEML SVQDVEEILH VPLLGVIPES QAVLNASNKG VPVIFDDQSD 240
  241 AGQAYQDTVA RLLGEQVEFR FLTEAKKGIF KRLFGG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..276] PSI-BLAST 35.09691 Cell division regulator MinD

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleoside-triphosphatase activity
    		•  2.50267116518023 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  2.42957469111629 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  2.40943522107938 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  2.40733363368781 bayes_pls_golite062009
  • binding
    		•  1.8576045268999 bayes_pls_golite062009
  • hydrolase activity
    		•  1.10968068468793 bayes_pls_golite062009
  • catalytic activity
    		•  0.458437698837681 bayes_pls_golite062009
  • protein binding
    		•  0.378225828131122 bayes_pls_golite062009
  • nucleotide binding
    		•  0.0601614967638421 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.0518926528648858 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.0231586743339878 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.0231035204040646 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle