Protein Overview: BRE1B_RAT

General Information:
Name(s) found:	BRE1B_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|81900544\|sp\|Q8CJB9.1\|BRE1B_RAT RecName: Full=E3 ubiquitin-protein ligase BRE1B; Short=BRE1-B; AltName: Full=RING finger protein 40; AltName: Full=Syntaxin-1-interacting RING finger protein; Short=Protein staring [NCBI NR] gi\|23618895\|ref\|NP_703201.1\| ring finger protein 40 [Rattus norvegicus] [NCBI NR] gi\|23268469\|gb\|AAN16401.1\|AF352815_1 staring [Rattus norvegicus] [NCBI NR] gi\|149067707\|gb\|EDM17259.1\| ring finger protein 40, isoform CRA_d [Rattus norvegicus] [NCBI NR] E3 ubiquitin-protein ligase BRE1B OS=Rattus norvegicus GN=Rnf40 PE=1 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):1-180591133 Staring [hmr_yeast5_DM3-1_pombe.fasta] ring finger protein 40; staring protein [HMR_022704-rand.fasta] ring finger protein 40 [Rattus norvegicus]gi\|23268469\|gb\|AAN16401.1\| staring [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Ubiquitin-protein ligase BRE1B [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Tax_Id=10116 Staring [EBI-IPI_rat_3.13_12-01-2005_con_reversed.fasta] E3 ubiquitin-protein ligase BRE1B (BRE1-B) (RING finger protein 40) (Syntaxin-1-interacting RING finger protein) (Protein staring) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] ring finger protein 40 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] ring finger protein 40, isoform CRA_d [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] staring [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 STARING [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Ubiquitin-protein ligase BRE1B (BRE1-B) (RING finger protein 40) (Syntaxin-1-interacting RING finger protein) (Protein staring) [nr-271106-contam.fasta] Tax_Id=10116 Gene_Symbol=Rnf40 E3 ubiquitin-protein ligase BRE1B [rat-ipi-250309-contam.fasta] E3 ubiquitin-protein ligase BRE1B OS=Rattus norvegicus GN=Rnf40 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	1002 amino acids
Gene Ontology:
Cellular Component:	nucleus [UNKNOWN][IEA] synaptosome [IDA] ubiquitin ligase complex [UNKNOWN][IEA] chromosome [IEA] protein complex [IDA]
Biological Process:	chromatin modification [IEA] histone monoubiquitination [UNKNOWN][IEA] ubiquitin-dependent protein catabolic process [IDA] histone H2B ubiquitination [UNKNOWN][IEA]
Molecular Function:	ubiquitin-protein ligase activity [UNKNOWN][IDA] zinc ion binding [IEA] protein binding [UNKNOWN] ubiquitin protein ligase binding [UNKNOWN][IEA] protein homodimerization activity [UNKNOWN][IEA] metal ion binding [IEA] syntaxin-1 binding [IPI] protein complex binding [IDA] ligase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGLSNKRAA GDGGSGPPEK KLNREEKTTT TLIEPIRLGG ISSTEEMDSK VLQFKNKKLA  60
   61 ERLEQRQACE DELRERIEKL EKRQATDDAT LLIVNRYWAQ LDETVEALLQ CYENQRELSS 120
  121 SGTEVPGCQE GLTRDVIPRT DPGTSDLREP LPMQFRAPLS EPALAFVVAL GASSCEEVEL 180
  181 QLQGRMEFSK AAVSRVVEAS DRLQRQVEEL CQRVYSRGDS EAPGEVARAR TRELGRENRR 240
  241 LQDLATQLQE KHHRISLEYS ELQDKVTSTE TKVLEMETTV EDLQWDIEKL RKREQKLNKH 300
  301 LAEALEQLNS GYYVSGSSTG FQGGQITLSM QKFEMLNAEL EENQELANSR MAELEKLQAE 360
  361 LQGAVRTNER LKVALRSLPE EVVRETGEYR MLQAQFSLLY NESLQVKTQL DEARGLLLAS 420
  421 KNSHLRHIEH MESDELGLQK KLRTEVIQLE DTLAQVRKEY EMLRIEFEQN LAANEQAGPI 480
  481 NREMRHLISS LQNHNHQLKG DAQRYKRKLR EVQAEIGKLR AQASGSSHCG PNLSHPDDSG 540
  541 LNALAPGKED SGPGPGGTPD SKKELALVAG ATSVASSVKK EELVSSEDDA QALAPGTQGL 600
  601 PSRGREPEAR PKRELREREG PSLGPPPAAS TLSRADREKA KAEEARRKES ELLKGLRAEL 660
  661 KKAQESQKEM KLLLDMYKSA PKEQRDKVQL MAAERKAKAE VDELRSRIRD LEERDRRESK 720
  721 KIADEDALRR IRQAEEQIEH LQRKLGATKQ EEEALLSEMD VTGQAFEDMQ EQNGRLLQQL 780
  781 REKDDANFKL MSERIKANQI HKLLREEKDE LGEQVLGLKS QVDAQLLTVQ KLEEKERALQ 840
  841 GSLGGVEKEL TLRSQALELN KRKAVEAAQL AEDLKVQLEH VQTRLREIQP CLAESRAARE 900
  901 KESFNLKRAQ EDISRLRRKL EKQRKVEVYA DADEILQEEI KEYKARLTCP CCNTRKKDAV 960
  961 LTKCFHVFCF ECVRGRYEAR QRKCPKCNAA FGAHDFHRVY IS

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: BRE1B_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: