Protein Overview: CLRN1_RAT

General Information:
Name(s) found:	CLRN1_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|81866515\|sp\|Q8CJ58.1\|CLRN1_RAT RecName: Full=Clarin-1; AltName: Full=Usher syndrome type-3 protein homolog [NCBI NR] gi\|23463273\|ref\|NP_695211.1\| clarin 1 [Rattus norvegicus] [NCBI NR] gi\|22773953\|gb\|AAN07149.1\|AF482698_1 Usher syndrome type III [Rattus norvegicus] [NCBI NR] Clarin-1 OS=Rattus norvegicus GN=Clrn1 PE=2 SV=1 [Swiss-Prot] Ensembl_locations(Chr-bp):2-140421719 Usher syndrome type III [hmr_yeast5_DM3-1_pombe.fasta] Usher syndrome type III A [HMR_022704-rand.fasta] Usher syndrome type III [Rattus norvegicus]gi\|23463273\|ref\|NP_695211.1\| Usher syndrome type III A [Rattus norvegicus] [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Usher syndrome type III [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta] Clarin-1 (Usher syndrome type-3 protein homolog) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] clarin 1 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Usher syndrome type III [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 USHER SYNDROME TYPE III [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Usher syndrome type III A [Rattus norvegicus] [nr-271106-contam.fasta] Tax_Id=10116 Gene_Symbol=Clrn1 Clarin-1 [rat-ipi-250309-contam.fasta] Clarin-1 OS=Rattus norvegicus GN=Clrn1 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	232 amino acids
Gene Ontology:
Cellular Component:	membrane [IEA] integral to membrane [IEA] cellular_component [ND]
Biological Process:	sensory perception of sound [UNKNOWN][IEA] biological_process [ND] photoreceptor cell maintenance [UNKNOWN] equilibrioception [UNKNOWN] visual perception [IEA] sensory perception of light stimulus [UNKNOWN] response to stimulus [IEA]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSQQKKIIF CMAGVFSFAC ALGVVTALGT PLWIKATVLC KTGALLVNAS GQELDKFMGE  60
   61 MQYGLFHGEG VRQCGLGARP FRFSFFPDLL KAIPVSIHVN IILFSMILVV LTMVGTAFFM 120
  121 YNAFGKPFES LHGPLGLYLV SFISGSCGCL VMILFASEVK IHRLSEKIAN FKEGTYAYKT 180
  181 QNENYTTSFW VVFICFFVHF LNGLLIRLAG FQFPFTKSKE TETTNVASDL MY

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein Overview: CLRN1_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: