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Protein Overview: CX6A1_RAT

General Information:
Name(s) found: CX6A1_RAT [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Cytochrome c oxidase subunit 6A1, mitochondrial OS=Rattus norvegicus GN=Cox6a1 PE=1 SV=2 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 111 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [UNKNOWN][IEA]
    membrane [IEA]
    mitochondrial respiratory chain complex IV [IEA]
    mitochondrial inner membrane [IEA]
    Biological Process: NONE FOUND
    Molecular Function: cytochrome-c oxidase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAVLSASR VSGLLGRALP RVGRPMSSGA HGEEGSARIW KALTYFVALP GVGVSMLNVF  60
   61 LKSRHEEHER PEFVAYPHLR IRTKPFPWGD GNHTLFHNPH MNPLPTGYED E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] PSI-BLAST 30.09691 Mitochondrial cytochrome c oxidase subunit VIa

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytochrome-c oxidase activity
    		•  12.2317532545955 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors
    		•  12.2317532545955 bayes_pls_golite062009
  • oxidoreductase activity, acting on heme group of donors, oxygen as acceptor
    		•  12.2317532545955 bayes_pls_golite062009
  • heme-copper terminal oxidase activity
    		•  11.9189904362651 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  5.77104248101315 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  5.61858135414369 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  5.0189825255034 bayes_pls_golite062009
  • oxidoreductase activity
    		•  4.93709142475202 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  4.77145907631723 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.57436007698077 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.16699951799043 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.97113110639524 bayes_pls_golite062009
  • catalytic activity
    		•  0.448769452796145 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.16

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle