YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SC22B_RAT

General Information:
Name(s) found: SC22B_RAT [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|71043604|ref|NP_001020857.1| SEC22 vesicle trafficking protein homolog B [Rattus norvegicus] [NCBI NR]
  • gi|68534274|gb|AAH98725.1| SEC22 vesicle trafficking protein homolog B (S. cerevisiae) [Rattus norvegicus] [NCBI NR]
  • ref|XP_227499.1| similar to vesicle trafficking protein sec22b [Rattus norvegicus] [NCBI NR]
  • gi|149030538|gb|EDL85575.1| SEC22 vesicle trafficking protein-like 1 (S. cerevisiae) [Rattus norvegicus] [NCBI NR]
  • gi|116256065|sp|Q4KM74.3|SC22B_RAT RecName: Full=Vesicle-trafficking protein SEC22b; AltName: Full=SEC22 vesicle-trafficking protein homolog B; AltName: Full=SEC22 vesicle-trafficking protein-like 1; AltName: Full=ERS24; AltName: Full=ERS-24 [NCBI NR]
  • Vesicle-trafficking protein SEC22b OS=Rattus norvegicus GN=Sec22b PE=1 SV=3 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):2-187922188;2-187922188 [hmr_yeast5_DM3-1_pombe.fasta]
  • similar to vesicle trafficking protein sec22b [HMR_022704-rand.fasta]
  • similar to vesicle trafficking protein sec22b [Rattus norvegicus]gi|6755448|ref|NP_035472.1| SEC22 vesicle trafficking protein-like 1 [Mus musculus]gi|4759086|ref|NP_004883.1| vesicle trafficking protein sec22b [Homo sapiens]gi|12655033|gb|AAH01364.1| [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 SEC22 vesicle trafficking protein-like 1 [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Tax_Id=10116 PREDICTED: similar to vesicle trafficking protein sec22b [EBI-IPI_rat_3.08_07-12-2005_origrev_con.fasta]
  • Tax_Id=10116 Similar to veSicle trafficking protein Sec22b [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta]
  • Vesicle-trafficking protein SEC22b (SEC22 vesicle-trafficking protein homolog B) (SEC22 vesicle-trafficking protein-like 1) (ERS24) (ERS-24) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • SEC22 vesicle trafficking protein homolog B (S. cerevisiae) [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • SEC22 vesicle trafficking protein homolog B [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • SEC22 vesicle trafficking protein-like 1 (S. cerevisiae) [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 SIMILAR TO VESICLE TRAFFICKING PROTEIN SEC22B [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • SEC22 vesicle trafficking protein-like 1 [Rattus norvegicus] [nr-271106-contam.fasta]
  • Tax_Id=10116 Gene_Symbol=Sec22b Vesicle-trafficking protein SEC22b [rat-ipi-250309-contam.fasta]
  • Vesicle-trafficking protein SEC22b OS=Rattus norvegicus GN=Sec22b [011711_HMR.fasta]
    • Organism: Rattus norvegicus
    Length: 215 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum membrane [UNKNOWN][IEA]
    melanosome [IEA]
    membrane [IEA]
    integral to membrane [IEA]
    Golgi membrane [UNKNOWN][IEA]
    endoplasmic reticulum [IEA]
    Golgi apparatus [IEA]
    ER-Golgi intermediate compartment [UNKNOWN]
    ER-Golgi intermediate compartment membrane [IEA]
    Biological Process: vesicle-mediated transport [UNKNOWN][IEA]
    protein transport [IEA]
    Molecular Function: protein binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLLTMIARV ADGLPLAASM QEDEQSGRDL QQYQSQAKQL FRKLNEQSPT RCTLEAGAMT  60
   61 FHYIIEQGVC YLVLCEAAFP KKLAFAYLED LHSEFDEQHG KKVPTVSRPY SFIEFDTFIQ 120
  121 KTKKLYIDSR ARRNLGSINT ELQDVQRIMV ANIEEVLQRG EALSALDSKA NNLSSLSKKY 180
  181 RQDAKYLNMR STYAKLAAVA VFFIMLIVYV RFWWL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..215] PSI-BLAST 53.0 No description for 2nupC was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle