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Protein Overview: COX5A_RAT

General Information:
Name(s) found: COX5A_RAT [Swiss-Prot]
Description(s) found:
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  • pir||S04592 cytochrome-c oxidase (EC 1.9.3.1) chain Va precursor - rat [NCBI NR]
  • gi|55971|emb|CAA33134.1| cytochrome c oxidase subunit Va preprotein [Rattus norvegicus] [NCBI NR]
  • gi|24233541|ref|NP_665726.1| cytochrome c oxidase, subunit Va [Rattus norvegicus] [NCBI NR]
  • gi|149041787|gb|EDL95628.1| cytochrome c oxidase, subunit Va, isoform CRA_a [Rattus norvegicus] [NCBI NR]
  • gi|117100|sp|P11240.1|COX5A_RAT RecName: Full=Cytochrome c oxidase subunit 5A, mitochondrial; AltName: Full=Cytochrome c oxidase polypeptide Va; Flags: Precursor [NCBI NR]
  • (P11240) Cytochrome c oxidase polypeptide Va, mitochondrial precursor (EC 1.9.3.1) [Swiss-Prot]
  • Cytochrome c oxidase subunit 5A, mitochondrial OS=Rattus norvegicus GN=Cox5a PE=1 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):8-59690238 Cytochrome c oxidase polypeptide Va, mitochondrial precursor [hmr_yeast5_DM3-1_pombe.fasta]
  • cytochrome c oxidase, subunit Va [HMR_022704-rand.fasta]
  • cytochrome c oxidase, subunit Va [Rattus norvegicus]gi|55971|emb|CAA33134.1| cytochrome c oxidase subunit Va preprotein [Rattus norvegicus]gi|117100|sp|P11240|COXA_RAT Cytochrome c oxidase polypeptide Va, mitochondrial precursorgi|92182|pir||S04592 cyt [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 Cytochrome c oxidase polypeptide Va, mitochondrial precursor [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Cytochrome c oxidase subunit 5A, mitochondrial precursor (Cytochrome c oxidase polypeptide Va) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • cytochrome c oxidase, subunit Va [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • cytochrome c oxidase, subunit Va, isoform CRA_a [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • cytochrome c oxidase subunit Va preprotein [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 CYTOCHROME C OXIDASE POLYPEPTIDE VA, MITOCHONDRIAL PRECURSOR [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10116 Gene_Symbol=Cox5a Cytochrome c oxidase subunit 5A, mitochondrial [rat-ipi-250309-contam.fasta]
  • Cytochrome c oxidase subunit 5A, mitochondrial OS=Rattus norvegicus GN=Cox5a [011711_HMR.fasta]
    • Organism: Rattus norvegicus
    Length: 146 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [UNKNOWN][IEA]
    membrane [IEA]
    mitochondrial inner membrane [UNKNOWN][IEA]
    Biological Process: NONE FOUND
    Molecular Function: cytochrome-c oxidase activity [IDA][TAS]
    metal ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAAALRRCT AAAAARGLLH PVSAPSPAAA VCSIRCYSHG SHETDEEFDA RWVTYFNKPD  60
   61 IDAWELRKGM NTLVGYDLVP EPKIIDAALR ACRRLNDFAS AVRILEVVKD KAGPHKEIYP 120
  121 YVIQELRPTL NELGISTPEE LGLDKV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] PSI-BLAST 58.045757 Cytochrome c oxidase subunit E


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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