Protein Overview: DKC1_RAT

General Information:
Name(s) found:	DKC1_RAT [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|71680944\|gb\|AAH99832.1\| Dyskeratosis congenita 1, dyskerin [Rattus norvegicus] [NCBI NR] gi\|2851506\|sp\|P40615.4\|DKC1_RAT RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName: Full=Dyskerin; AltName: Full=Nucleolar protein family A member 4; AltName: Full=snoRNP protein DKC1; AltName: Full=Nopp140-associated protein of 57 kDa; AltN [NCBI NR] gi\|2739325\|emb\|CAA84402.1\| NAP57 [Rattus norvegicus] [NCBI NR] gi\|19173790\|ref\|NP_596910.1\| dyskeratosis congenita 1, dyskerin [Rattus norvegicus] [NCBI NR] H/ACA ribonucleoprotein complex subunit 4 OS=Rattus norvegicus GN=Dkc1 PE=1 SV=4 [Swiss-Prot] Ensembl_locations(Chr-bp):None Dyskerin [hmr_yeast5_DM3-1_pombe.fasta] dyskeratosis congenita 1, dyskerin [HMR_022704-rand.fasta] dyskeratosis congenita 1, dyskerin [Rattus norvegicus]gi\|2739325\|emb\|CAA84402.1\| NAP57 [Rattus norvegicus]gi\|2851506\|sp\|P40615\|DKC1_RAT Dyskerin (Nucleolar protein NAP57) [nrdb_11152004_Chlamydomonas] Tax_Id=10116 Dyskeratosis congenita 1, dyskerin [EBI-IPI_rat_3.13_12-01-2005_con_reversed.fasta] (NM_133419) dyskeratosis congenita 1, dyskerin [Rattus norvegicus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta] H/ACA ribonucleoprotein complex subunit 4 (Dyskerin) (Nucleolar protein family A member 4) (snoRNP protein DKC1) (Nopp140-associated protein of 57 kDa) (Nucleolar protein NAP57) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] dyskeratosis congenita 1, dyskerin [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Dyskeratosis congenita 1, dyskerin [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] NAP57 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta] Tax_Id=10116 DYSKERIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta] Tax_Id=10116 Gene_Symbol=Dkc1 H/ACA ribonucleoprotein complex subunit 4 [rat-ipi-250309-contam.fasta] H/ACA ribonucleoprotein complex subunit 4 OS=Rattus norvegicus GN=Dkc1 [011711_HMR.fasta]
Organism:	Rattus norvegicus
Length:	509 amino acids
Gene Ontology:
Cellular Component:	nucleus [IEA] Cajal body [IDA] nucleolus [IDA] small nucleolar ribonucleoprotein complex [IDA] nucleoplasm [IDA]
Biological Process:	cell proliferation [IDA] pseudouridine synthesis [IEA] RNA processing [IEA] rRNA processing [IEA]
Molecular Function:	RNA binding [IEA] protein binding [IDA] pseudouridine synthase activity [IEA] isomerase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADAEAAMTF PKKHKKKKER KPLPEADVAE IQHAEDFLIK PESKAAQLDT SQWPLLLKNF  60
   61 DRLNVRTTHY TPIPCGSNPL KREIGEYVRT GFINLDKPSN PSSHEVVAWI RRILRVEKTG 120
  121 HSGTLDPKVT GCLIVCIERA TRLVKSQQSA GKEYVGVVRL HNAIEGTAQL SRALETLTGA 180
  181 LFQRPPLIAA VKRQLRVRTI YESRVVEYDP ERRLGVFWVS CEAGTYIRTL CVHLGLLLGV 240
  241 GGQMQELRRV RSGVVGERDH MVTMHDVLDA QYLYDHHRDE SYLRRVVFPL EKLLTSHKRL 300
  301 VMKDSAVNAI CYGAKIMLPG LLRYEDGIEV NQEVVVITTK GEAVCVAIAL MTTAVISTCD 360
  361 HGVVAKIKRV IMERDTYPRK WGLGPKASQK KQLIKQGLLD KHGRPTDGTP ASWTRDYVDY 420
  421 SDSSKKATAA EATPGPGVTA DAASIVKRKR DSDSDADEAT PTTTPRVKKE KKKKKEKADG 480
  481 GEEAAEDGDG DATRKKKKKK ARAAEELSG

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.93

Protein Overview: DKC1_RAT

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: