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Protein Overview: gi|27692712

General Information:
Name(s) found: gi|27692712 [NCBI NR]
Description(s) found:
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  • gi|27692712|ref|XP_215607.1| PREDICTED: similar to S100 calcium-binding protein A13 [Rattus norvegicus] [NCBI NR]
  • Ensembl_locations(Chr-bp):2-178968987 [hmr_yeast5_DM3-1_pombe.fasta]
  • similar to 8KDa amlexanox-binding protein [HMR_022704-rand.fasta]
  • similar to 8KDa amlexanox-binding protein [Rattus norvegicus] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10116 PREDICTED: similar to 8KDa amlexanox-binding protein [EBI-IPI_rat_3.17_05-10-2006_con_reversed.fasta]
  • Tax_Id=10116 Similar to 8KDa amlexanox-binding protein [EBI-IPI_rat_3.05_04-04-2005_origrev.fasta]
  • PREDICTED: similar to S100 calcium-binding protein A13 [Rattus norvegicus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10116 SIMILAR TO 8KDA AMLEXANOX-BINDING PROTEIN [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10116 Gene_Symbol=S100a13 similar to S100 calcium-binding protein A13 [rat-ipi-250309-contam.fasta]
  • Protein S100a13 OS=Rattus norvegicus GN=S100a13 PE=4 SV=2 [20141208_RAT.fasta]
  • Protein S100a13 OS=Rattus norvegicus GN=S100a13 PE=1 SV=2 [RAT.fasta.20160308]
    • Organism: Rattus norvegicus
    Length: 98 amino acids

    Gene Ontology:
    Cellular Component: nucleus [UNKNOWN]
    extracellular space [UNKNOWN]
    perinuclear region of cytoplasm [UNKNOWN]
    cytoplasm [UNKNOWN]
    cytosol [UNKNOWN]
    cellular_component [ND]
    Biological Process: regulation of cell shape [IMP]
    positive regulation of cell proliferation [IMP]
    positive regulation of I-kappaB kinase/NF-kappaB cascade [UNKNOWN]
    response to copper ion [IEP]
    interleukin-1 alpha secretion [UNKNOWN]
    response to electrical stimulus [IEP]
    Molecular Function: zinc ion binding [UNKNOWN]
    protein binding [UNKNOWN]
    protein homodimerization activity [UNKNOWN]
    copper ion binding [UNKNOWN]
    calcium ion binding [UNKNOWN]
    fibroblast growth factor 1 binding [UNKNOWN]
    molecular_function [ND]
    RAGE receptor binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEPPTELE SAIETVVTTF FTFAGREGRK GSLSTNEFKE LVTQQLPHLL KDVGSLDEKM  60
   61 KSLDVNQDSE LKFNEYWRLI GELAKEIRKE KVLAIRKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle