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Protein Overview: APOM_MOUSE

General Information:
Name(s) found: APOM_MOUSE [Swiss-Prot]
Description(s) found:
Found 23 descriptions.
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  • Apolipoprotein M OS=Mus musculus GN=Apom PE=1 SV=1 [Swiss-Prot]
    • Organism: Mus musculus
    Length: 190 amino acids

    Gene Ontology:
    Cellular Component: extracellular space [UNKNOWN]
    discoidal high-density lipoprotein particle [IDA]
    high-density lipoprotein particle [IEA]
    extracellular region [IDA]
    Biological Process: lipid transport [IEA]
    high-density lipoprotein particle assembly [IMP]
    reverse cholesterol transport [IMP]
    high-density lipoprotein particle remodeling [IMP]
    high-density lipoprotein particle clearance [IMP]
    cholesterol efflux [IMP]
    lipoprotein metabolic process [IMP]
    transport [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFHQVWAALL SLYGLLFNSM NQCPEHSQLT ALGMDDTETP EPHLGLWYFI AGAASTTEEL  60
   61 ATFDPVDNIV FNMAAGSAPR QLQLRATIRT KSGVCVPRKW TYRLTEGKGN MELRTEGRPD 120
  121 MKTDLFSSSC PGGIMLKETG QGYQRFLLYN RSPHPPEKCV EEFQSLTSCL DFKAFLVTPR 180
  181 NQEACPLSSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..190] FFAS03 6.54 Complement protein C8gamma

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  2.0790253220851 bayes_pls_golite062009
  • lipid transporter activity
    		•  2.0622452030785 bayes_pls_golite062009
  • binding
    		•  2.00683433708395 bayes_pls_golite062009
  • lipid binding
    		•  0.974664962702851 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.92165376847661 bayes_pls_golite062009
  • prostaglandin-D synthase activity
    		•  0.151761237567045 bayes_pls_golite062009
  • protein binding
    		•  0.113932394283891 bayes_pls_golite062009
  • fatty acid transporter activity
    		•  0.0209836240489655 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle