| Protein: | APOM_MOUSE |
| Organism: | Mus musculus |
| Length: | 190 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APOM_MOUSE.
| Description | E-value | Query Range |
Subject Range |
|
|
384.0 | [0..1] | [190..1] |
|
|
380.0 | [0..1] | [189..1] |
|
|
378.0 | [0..1] | [189..1] |
|
|
376.0 | [0..1] | [189..1] |
|
|
368.0 | [0..1] | [189..1] |
|
|
368.0 | [0..1] | [189..1] |
|
|
361.0 | [0..1] | [190..1] |
|
|
347.0 | [0..1] | [189..1] |
|
Region A: Residues: [1-190] |
1 11 21 31 41 51
| | | | | |
1 MFHQVWAALL SLYGLLFNSM NQCPEHSQLT ALGMDDTETP EPHLGLWYFI AGAASTTEEL 60
61 ATFDPVDNIV FNMAAGSAPR QLQLRATIRT KSGVCVPRKW TYRLTEGKGN MELRTEGRPD 120
121 MKTDLFSSSC PGGIMLKETG QGYQRFLLYN RSPHPPEKCV EEFQSLTSCL DFKAFLVTPR 180
181 NQEACPLSSK
|
| Detection Method: |  |
| Confidence: | 6.54 |
| Match: | 1iw2A |
| Description: | Complement protein C8gamma |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 2.0790253220851 | bayes_pls_golite062009 |
| lipid transporter activity | 2.0622452030785 | bayes_pls_golite062009 |
| binding | 2.00683433708395 | bayes_pls_golite062009 |
| lipid binding | 0.974664962702851 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.92165376847661 | bayes_pls_golite062009 |
| prostaglandin-D synthase activity | 0.151761237567045 | bayes_pls_golite062009 |
| protein binding | 0.113932394283891 | bayes_pls_golite062009 |
| fatty acid transporter activity | 0.0209836240489655 | bayes_pls_golite062009 |
