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Protein Overview: TSNAX_MOUSE

General Information:
Name(s) found: TSNAX_MOUSE [Swiss-Prot]
Description(s) found:
Found 31 descriptions.
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  • Translin-associated protein X OS=Mus musculus GN=Tsnax PE=1 SV=1 [Swiss-Prot]
    • Organism: Mus musculus
    Length: 290 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGKEGPGGF RKRKHDTFPH NQRREGKDAS LSSPVMLAFK SFQQELDARH DKYERLVKLS  60
   61 RDITVESKRT IFLLHRITSA PDMEEILTES ESKLDGVRQK ILQVAQELSG EDMHQFHRAV 120
  121 TTGLQEYVEA VSFQHFIKTR SLISMEEINK QLTFTAEDSG KESKTPPAEG QEKQLVTWRL 180
  181 KLTPVDYLLG VADLTGELMR MCINSVGNGD IDTPFEVSQF LRQVYDGFSF IGNTGPYEVS 240
  241 KKLYTLKQSL AKVENACYAL KVRGSEIPKH MLADVFSVKT DMIDQEESIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..290] PSI-BLAST 62.0 Testis/brain RNA-binding protein (TB-RBP)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleic acid binding
    		•  2.3188629697616 bayes_pls_golite062009
  • binding
    		•  1.94480454487356 bayes_pls_golite062009
  • DNA binding
    		•  1.58937601934226 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  1.56664100418006 bayes_pls_golite062009
  • single-stranded DNA binding
    		•  1.3845125644471 bayes_pls_golite062009
  • RNA binding
    		•  0.41002712924518 bayes_pls_golite062009
  • protein binding
    		•  0.335015582245911 bayes_pls_golite062009
  • telomeric DNA binding
    		•  0.12832953268809 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle