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Protein Overview: FRDA_MOUSE

General Information:
Name(s) found: FRDA_MOUSE [Swiss-Prot]
Description(s) found:
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  • gi|74137517|dbj|BAE35799.1| unnamed protein product [Mus musculus] [NCBI NR]
  • gi|6679863|ref|NP_032070.1| frataxin [Mus musculus] [NCBI NR]
  • gi|6016046|sp|O35943.1|FRDA_MOUSE RecName: Full=Frataxin, mitochondrial; Short=Fxn; Flags: Precursor [NCBI NR]
  • gi|2344992|gb|AAB67778.1| frataxin [Mus musculus] [NCBI NR]
  • gi|124376384|gb|AAI32338.1| Frataxin [Mus musculus] [NCBI NR]
  • gi|116138641|gb|AAI25338.1| Frataxin [Mus musculus] [NCBI NR]
  • Frataxin, mitochondrial OS=Mus musculus GN=Fxn PE=1 SV=1 [Swiss-Prot]
  • Ensembl_locations(Chr-bp):19-23555169 Frataxin, mitochondrial precursor [hmr_yeast5_DM3-1_pombe.fasta]
  • frataxin [HMR_022704-rand.fasta]
  • Frataxin, mitochondrial precursor [ipi.MOUSE.v3.06.fasta]
  • frataxin [Mus musculus]gi|2344992|gb|AAB67778.1| frataxin [Mus musculus]gi|6016046|sp|O35943|FRDA_MOUSE Frataxin, mitochondrial precursor (Fxn) [nrdb_11152004_Chlamydomonas]
  • Tax_Id=10090 Frataxin, mitochondrial precursor [EBI-IPI_mouse_3.17_05-10-2006_con_reversed.fasta]
  • (NM_008044) Friedreich ataxia [Mus musculus] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • frataxin [Mus musculus] [mouse-NCBI-010306_contam_rand.fasta]
  • Frataxin, mitochondrial precursor (Fxn) [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Frataxin [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • unnamed protein product [Mus musculus] [NCBI-RefSeq_multi-organisms_na_08-12-2008_con_reversed.fasta]
  • Tax_Id=10090 FRATAXIN, MITOCHONDRIAL PRECURSOR [Xentr4_EBI-IPI_human_mouse_rat_Xenopus_tropicalis_laevis_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Fxn Frataxin, mitochondrial [mouse-ipi-250309-contam.fasta]
  • frataxin precursor [Mus musculus] [NCBI-RefSeq_mouse_na_09-14-2009_con_reversed.fasta]
  • Tax_Id=10090 Gene_Symbol=Fxn Frataxin, mitochondrial precursor [ipi.MOUSE_jw_12may08.contam.fasta]
  • Tax_Id=10090 Gene_Symbol=Fxn Frataxin, mitochondrial precursor ENSMUSG00000059363 IPI00136201 IPI00461629 [IPIxENS.MOUSE_plus_REVERSE.fasta]
  • frataxin, mitochondrial precursor [Mus musculus] [NCBI-RefSeq_mouse_na_05-17-2010_reversed.fasta]
  • IPI:IPI00136201.1|SWISS-PROT:O35943|TREMBL:Q3TV21;Q3UG34|ENSEMBL:ENSMUSP00000080081|REFSEQ:NP_032070|VEGA:OTTMUSP00000042113 Tax_Id=10090 Gene_Symbol=Fxn Frataxin, mitochondrial [ipi.MOUSE.fasta.20090209]
  • Frataxin, mitochondrial OS=Mus musculus GN=Fxn [011711_HMR.fasta]
  • sp|O35943|FRDA_MOUSE Frataxin, mitochondrial OS=Mus musculus GN=Fxn PE=1 SV=1 [uniprot.sptr.mouse.20130102]
  • tr|Q3TV21|Q3TV21_MOUSE Frataxin OS=Mus musculus GN=Fxn PE=2 SV=1 [uniprot.sptr.mouse.20130102]
  • Frataxin OS=Mus musculus GN=Fxn PE=2 SV=1 [mouse-uniprot-290313-contam.fasta]
  • Isoform of O35943, Frataxin OS=Mus musculus GN=Fxn PE=1 SV=1 [MOUSE.fasta.20160308]
    • Organism: Mus musculus
    Length: 207 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWAFGGRAAV GLLPRTASRA SAWVGNPRWR EPIVTCGRRG LHVTVNAGAT RHAHLNLHYL  60
   61 QILNIKKQSV CVVHLRNLGT LDNPSSLDET AYERLAEETL DSLAEFFEDL ADKPYTLEDY 120
  121 DVSFGDGVLT IKLGGDLGTY VINKQTPNKQ IWLSSPSSGP KRYDWTGKNW VYSHDGVSLH 180
  181 ELLARELTKA LNTKLDLSSL AYSGKGT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..75] MSA 2.024978 View MSA. No confident structure predictions are available.
    2 View Details [76..207] PSI-BLAST 47.221849 C-terminal domain of frataxin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • iron chaperone activity
    		•  4.16905358201916 bayes_pls_golite062009
  • ferric iron binding
    		•  3.23865994858009 bayes_pls_golite062009
  • iron ion binding
    		•  2.78584553912929 bayes_pls_golite062009
  • 2 iron, 2 sulfur cluster binding
    		•  2.25545886640675 bayes_pls_golite062009
  • transition metal ion binding
    		•  1.85229574432416 bayes_pls_golite062009
  • binding
    		•  1.75179885686234 bayes_pls_golite062009
  • metallochaperone activity
    		•  1.67572555512957 bayes_pls_golite062009
  • ferrous iron binding
    		•  1.61332056179381 bayes_pls_golite062009
  • protein binding
    		•  1.50639308293007 bayes_pls_golite062009
  • cation binding
    		•  1.42164579673909 bayes_pls_golite062009
  • metal ion binding
    		•  1.42164579673909 bayes_pls_golite062009
  • ion binding
    		•  1.4150396069236 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.07282105096776 bayes_pls_golite062009
  • metal cluster binding
    		•  0.602901470550009 bayes_pls_golite062009
  • iron-sulfur cluster binding
    		•  0.602901470550009 bayes_pls_golite062009
  • oxidoreductase activity, oxidizing metal ions, oxygen as acceptor
    		•  0.310374472796773 bayes_pls_golite062009
  • ferroxidase activity
    		•  0.310374472796773 bayes_pls_golite062009
  • catalytic activity
    		•  0.276917867171685 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
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