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Protein Overview: YA4C_SCHPO

General Information:
Name(s) found: YA4C_SCHPO [Swiss-Prot]
Description(s) found:
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  • gi|19113836|ref|NP_592924.1| hypothetical protein SPAC31A2.12 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • Arrestin domain-containing protein C31A2.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC31A2.12 PE=1 SV=1 [Swiss-Prot]
    • Organism: Schizosaccharomyces pombe 972h-
    Length: 596 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNILSRKENV ASYFDIRVAA EHDLIVIQGL ADSAEPTPLS GSVVLCLNEA ISVKAISLKL  60
   61 VGKCRISWSE PSPTVRGGQR HNKQEYVVYE KNWIFVPYTG ANRTLRAGNY EYPFHVMLPG 120
  121 DIAESVEGLQ SCYVVYRLKA SIDRTGLASK MVKKKHIRLI RALPADAIEY TQTISVDNTW 180
  181 PNKIEYTISV PTKAYAIGSY IPIHFVLVPL LKRLTIGKIS ITLKEYITLH VAHGYNGLPA 240
  241 SKDEVRTVRS LQTEELEEFS DHYELTKNLE LPSSLVECLQ DCDLDGIKIR HKLKFSVSLR 300
  301 NPDGHISELR AALPVVLMIP PQLFGDRAEV ESLRENFESF NQPLPSYQNS MYDRLYDGLS 360
  361 YSNLDTPLPS GATTPRRRDS MEPTYASNEA HRRQLIAGLT ELALQQQPQG RSPNEHSPSN 420
  421 HPEDFPPSFS LGSNPSSGAA SAVITRNPSE TSLADLSRVP SYKEATRSAV PLESPLQSTL 480
  481 PSYEDVARIE HLSRPPSPGI VTPPQRTSPS FFVSPTESTR QSLDSRRSFE HSTSSSSGIS 540
  541 PSHSSASLAH LSQASNPNGS SSAPHRPTSA RVGSHRNALD ALRRARMLPS GFSRRN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..341] PSI-BLAST 51.154902 Arrestin
    2 View Details [342..441] deduced N/A No confident structure predictions are available.
    3 View Details [442..596] FFAS03 0.991 No description for 2j63A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.01555579124143 bayes_pls_golite062009
  • protein binding
    		•  1.50286160643298 bayes_pls_golite062009
  • ligand-gated ion channel activity
    		•  0.0676214219421661 bayes_pls_golite062009
  • ligand-gated channel activity
    		•  0.0676214219421661 bayes_pls_golite062009
  • cation channel activity
    		•  0.0318083563912285 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle