| Protein: | YA4C_SCHPO |
| Organism: | Schizosaccharomyces pombe 972h- |
| Length: | 596 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YA4C_SCHPO.
| Description | E-value | Query Range |
Subject Range |
|
|
210.0 | [0..7] | [537..12] |
|
|
208.0 | [0..7] | [523..12] |
|
|
201.0 | [0..12] | [571..17] |
|
|
200.0 | [0..8] | [339..10] |
|
|
200.0 | [0..8] | [339..5] |
|
|
199.0 | [0..8] | [339..10] |
|
|
198.0 | [0..8] | [339..11] |
|
|
197.0 | [0..8] | [344..11] |
|
Region A: Residues: [1-341] |
1 11 21 31 41 51
| | | | | |
1 MNILSRKENV ASYFDIRVAA EHDLIVIQGL ADSAEPTPLS GSVVLCLNEA ISVKAISLKL 60
61 VGKCRISWSE PSPTVRGGQR HNKQEYVVYE KNWIFVPYTG ANRTLRAGNY EYPFHVMLPG 120
121 DIAESVEGLQ SCYVVYRLKA SIDRTGLASK MVKKKHIRLI RALPADAIEY TQTISVDNTW 180
181 PNKIEYTISV PTKAYAIGSY IPIHFVLVPL LKRLTIGKIS ITLKEYITLH VAHGYNGLPA 240
241 SKDEVRTVRS LQTEELEEFS DHYELTKNLE LPSSLVECLQ DCDLDGIKIR HKLKFSVSLR 300
301 NPDGHISELR AALPVVLMIP PQLFGDRAEV ESLRENFESF N
|
| Detection Method: |  |
| Confidence: | 51.154902 |
| Match: | 1jsyA |
| Description: | Arrestin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.01555579124143 | bayes_pls_golite062009 |
| protein binding | 1.50286160643298 | bayes_pls_golite062009 |
| ligand-gated ion channel activity | 0.0676214219421661 | bayes_pls_golite062009 |
| ligand-gated channel activity | 0.0676214219421661 | bayes_pls_golite062009 |
| cation channel activity | 0.0318083563912285 | bayes_pls_golite062009 |
|
Region A: Residues: [342-441] |
1 11 21 31 41 51
| | | | | |
1 QPLPSYQNSM YDRLYDGLSY SNLDTPLPSG ATTPRRRDSM EPTYASNEAH RRQLIAGLTE 60
61 LALQQQPQGR SPNEHSPSNH PEDFPPSFSL GSNPSSGAAS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [442-596] |
1 11 21 31 41 51
| | | | | |
1 AVITRNPSET SLADLSRVPS YKEATRSAVP LESPLQSTLP SYEDVARIEH LSRPPSPGIV 60
61 TPPQRTSPSF FVSPTESTRQ SLDSRRSFEH STSSSSGISP SHSSASLAHL SQASNPNGSS 120
121 SAPHRPTSAR VGSHRNALDA LRRARMLPSG FSRRN
|
| Detection Method: | |
| Confidence: | 0.991 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
