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Protein Overview: DNAA_YERPN

General Information:
Name(s) found: DNAA_YERPN [Swiss-Prot]
Description(s) found:
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  • gi|229904654|ref|ZP_04519765.1| chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator [Yersinia pestis Nepal516] [NCBI NR]
  • gi|229678772|gb|EEO74877.1| chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator [Yersinia pestis Nepal516] [NCBI NR]
  • gi|123073045|sp|Q1CCJ8.1|DNAA_YERPN RecName: Full=Chromosomal replication initiator protein dnaA [NCBI NR]
  • gi|108814115|ref|YP_649882.1| chromosomal replication initiation protein [Yersinia pestis Nepal516] [NCBI NR]
  • gi|108777763|gb|ABG20282.1| chromosomal replication initiator protein DnaA [Yersinia pestis Nepal516] [NCBI NR]
  • Chromosomal replication initiator protein DnaA OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=dnaA PE=3 SV=1 [Swiss-Prot]
  • chromosomal replication initiator protein [Yersinia pestis Nepal516] [nr-271106-contam.fasta]
    • Organism: Yersinia pestis Nepal516
    Length: 462 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSLWQQCL ARLQDELPAT EFSMWIRPLQ AELSDNTLAL YAPNRFVLDW VRDKYLNNIN  60
   61 GLLNDFCGTE VPLLRFEVGS KPAARAHNNP VTASVSAPVA PVTRSAPMRP SWDNSPAQPE 120
  121 LSYRSNVNPK HTFDNFVEGK SNQLARAAAR QVADNPGGAY NPLFLYGGTG LGKTHLLHAV 180
  181 GNGIMARKAN AKVVYMHSER FVQDMVKALQ NNAIEEFKRY YRSVDALLID DIQFFANKER 240
  241 SQEEFFHTFN ALLEGNQQII LTSDRYPKEI NGVEDRLKSR FGWGLTVAIE PPELETRVAI 300
  301 LMKKADENDI RLPGEVAFFI AKRLRSNVRE LEGALNRVIA NANFTGRAIT IDFVREALRD 360
  361 LLALQEKLVT IDNIQKTVAE YYKIKVADLL SKRRSRSVAR PRQMAMALAK ELTNHSLPEI 420
  421 GDAFGGRDHT TVLHACRKIE QLREESHDIK EDFSNLIRTL SS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..68] PSI-BLAST 11.0 No description for 2e0gA was found.
    2 View Details [69..348] PSI-BLAST 15.69897 Crystal structure of sigm54 activator (AAA+ ATPase) in the inactive state
    3 View Details [349..462] PSI-BLAST 32.0 No description for 2hcbA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  1.37148167194523 bayes_pls_golite062009
  • binding
    		•  1.30574971150356 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.16998111465319 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.595576734443569 bayes_pls_golite062009
  • DNA binding
    		•  0.278289439071945 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.272450877010668 bayes_pls_golite062009
  • helicase activity
    		•  0.00674361801283974 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle