Protein Overview: gi|123987714, gi...

General Information:
Name(s) found:	gi\|208965434 [NCBI NR] gi\|123999108 [NCBI NR] gi\|123987714 [NCBI NR] gi\|117645360 [NCBI NR] gi\|109451858 [NCBI NR] gi\|109451280 [NCBI NR]
Description(s) found: Found 8 descriptions. SHOW ALL	gi\|208965434\|dbj\|BAG72731.1\| reticulon 4 receptor [synthetic construct] [NCBI NR] gi\|123999108\|gb\|ABM87137.1\| reticulon 4 receptor [synthetic construct] [NCBI NR] gi\|123987714\|gb\|ABM83817.1\| reticulon 4 receptor [synthetic construct] [NCBI NR] gi\|117645360\|emb\|CAL38146.1\| hypothetical protein [synthetic construct] [NCBI NR] gi\|109451858\|emb\|CAK54800.1\| RTN4R [synthetic construct] [NCBI NR] gi\|109451280\|emb\|CAK54501.1\| RTN4R [synthetic construct] [NCBI NR]
Organism:	synthetic construct
Length:	473 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRASAGGSR LLAWVLWLQA WQVAAPCPGA CVCYNEPKVT TSCPQQGLQA VPVGIPAASQ  60
   61 RIFLHGNRIS HVPAASFRAC RNLTILWLHS NVLARIDAAA FTGLALLEQL DLSDNAQLRS 120
  121 VDPATFHGLG RLHTLHLDRC GLQELGPGLF RGLAALQYLY LQDNALQALP DDTFRDLGNL 180
  181 THLFLHGNRI SSVPERAFRG LHSLDRLLLH QNRVAHVHPH AFRDLGRLMT LYLFANNLSA 240
  241 LPTEALAPLR ALQYLRLNDN PWVCDCRARP LWAWLQKFRG SSSEVPCSLP QRLAGRDLKR 300
  301 LAANDLQGCA VATGPYHPIW TGRATDEEPL GLPKCCQPDA ADKASVLEPG RPASAGNALK 360
  361 GRVPPGDSPP GNGSGPRHIN DSPFGTLPGS AEPPLTAVRP EGSEPPGFPT SGPRRRPGCS 420
  421 RKNRTRSHCR LGQAGSGGGG TGDSEGSGAL PSLTCSLTPL GLALVLWTVL GPC

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
extracellular matrix structural constituent	2.72113902188155	bayes_pls_golite062009
receptor activity	1.88785535225324	bayes_pls_golite062009
binding	1.87302803330255	bayes_pls_golite062009
signal transducer activity	1.69338277273283	bayes_pls_golite062009
molecular transducer activity	1.69338277273283	bayes_pls_golite062009
transmembrane receptor activity	1.60129047457824	bayes_pls_golite062009
glycosaminoglycan binding	1.28988458709664	bayes_pls_golite062009
extracellular matrix binding	0.907118880836251	bayes_pls_golite062009
protein binding	0.646159692466759	bayes_pls_golite062009
polysaccharide binding	0.61188190229906	bayes_pls_golite062009
receptor binding	0.525216740013984	bayes_pls_golite062009
G-protein coupled receptor activity	0.39590205214035	bayes_pls_golite062009
pattern binding	0.389630581129679	bayes_pls_golite062009
carbohydrate binding	0.343717562511172	bayes_pls_golite062009
nucleic acid binding	0.246718758617065	bayes_pls_golite062009
collagen binding	0.085405748322021	bayes_pls_golite062009

No functions predicted.

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..333]	PSI-BLAST	42.0	Reticulon 4 receptor (Nogo-66 receptor, Ngr)
2	View Details	[334..473]	MSA	1.650988	View MSA. No confident structure predictions are available.

Protein Overview: gi|123987714, gi...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: