YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|107104337

General Information:
Name(s) found: gi|107104337 [NCBI NR]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • gi|107104337|ref|ZP_01368255.1| hypothetical protein PaerPA_01005412 [Pseudomonas aeruginosa PACS2] [NCBI NR]
    • Organism: Pseudomonas aeruginosa PACS2
    Length: 448 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGIFRPAPH QAPLPDAEVD STYRRLRWQI FAGIFIGYAG YYLLRKNFSL AMPYLIEDGY  60
   61 SRGQLGVAMS AIAIAYGLSK FIMGLVSDRS NPRVFLPFGL LVSAAVMFIF GFAHWATSSV 120
  121 AIMFVLLFIN GWAQGMGWPP SGRTMVHWWS QKERGSVVSV WNVAHNVGGG LIGPLFLLGL 180
  181 ALFGDWRSAF YVPAIVAVGV AVFAYFAMRD TPQSCGLPPI EKHKDDYPEG YDEHHERELS 240
  241 TKEIFVTYVL RNKLLWYIAL ANVFVYLLRY GVLDWAPTYL KEAKHFNVDK SSWAYFFYEW 300
  301 AGIPGTLLCG WLSDKLFKGN RGATGVVFMI LVTVGTLIYW LNPAGNPAID MAALIMIGFL 360
  361 IYGPVMLIGL QALELAPKKA AGTAAGFTGL FGYLGGSVAA NALVGYTVDH FGWDGGFKLL 420
  421 IGACLLAILF LCLTLRKPAV QAAPQQAG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..448] PSI-BLAST 51.0 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • glucose-6-phosphate transmembrane transporter activity
    		•  8.42101508058771 bayes_pls_golite062009
  • hexose phosphate transmembrane transporter activity
    		•  8.42101508058771 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  7.11654923455995 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  6.7545566917184 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  6.7545566917184 bayes_pls_golite062009
  • glycerol-3-phosphate transmembrane transporter activity
    		•  6.56587510931539 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  5.46247398538901 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  4.58978526526921 bayes_pls_golite062009
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  3.94605227012838 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  3.88180006470231 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • monosaccharide transmembrane transporter activity
    		•  3.5078894802599 bayes_pls_golite062009
  • organic anion transmembrane transporter activity
    		•  3.3413526350788 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  2.99050613058546 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  2.62141276633776 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  2.52916479889426 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.47557586092261 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  2.15783210522667 bayes_pls_golite062009
  • solute:hydrogen symporter activity
    		•  2.10485633822652 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • binding
    		•  1.26757615356623 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • phosphate transmembrane transporter activity
    		•  0.312628600969375 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle