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Protein Overview: Mhcl-PB

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..110] deduced N/A No confident structure predictions are available.
2 View Details [111..326] MSA 1.108996 View MSA. No confident structure predictions are available.
3 View Details [327..484] PSI-BLAST 24.045757 Crystal structure of the Shank PDZ-ligand complex reveals a class I PDZ interaction and a novel PDZ-PDZ dimerization
4 View Details [485..1716] PSI-BLAST 1000.0 Heavy meromyosin subfragment
5 View Details [1717..2194] PSI-BLAST 5.522879 Crystal structure of human full-length vinculin (residues 1-1066)

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3
Term Confidence Notes
  • actinin binding
  • 6.63491164831411 bayes_pls_golite062009
  • structural constituent of muscle
  • 4.49823022706389 bayes_pls_golite062009
  • alpha-actinin binding
  • 4.16023108909992 bayes_pls_golite062009
  • actin binding
  • 3.71885072001885 bayes_pls_golite062009
  • cytoskeletal protein binding
  • 3.60106431937699 bayes_pls_golite062009
  • binding
  • 3.2595117613307 bayes_pls_golite062009
  • ErbB-2 class receptor binding
  • 2.92578423185022 bayes_pls_golite062009
  • protein binding
  • 2.35875654816667 bayes_pls_golite062009
  • actin filament binding
  • 1.91421788587359 bayes_pls_golite062009
  • myosin binding
  • 1.34447751574529 bayes_pls_golite062009
  • receptor binding
  • 1.19273986711251 bayes_pls_golite062009
  • transporter activity
  • 1.18978519116375 bayes_pls_golite062009
  • transmembrane transporter activity
  • 1.07211582292329 bayes_pls_golite062009
  • PDZ domain binding
  • 0.87883331498113 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 0.755223974149211 bayes_pls_golite062009
  • beta-catenin binding
  • 0.740091060781601 bayes_pls_golite062009
  • structural molecule activity
  • 0.710830054334763 bayes_pls_golite062009
  • molecular transducer activity
  • 0.663245640718285 bayes_pls_golite062009
  • signal transducer activity
  • 0.663245640718285 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
  • 0.549085929250683 bayes_pls_golite062009
  • hydrolase activity
  • 0.534910002338727 bayes_pls_golite062009
  • cell adhesion molecule binding
  • 0.403457741099606 bayes_pls_golite062009
  • transcription regulator activity
  • 0.387065538161985 bayes_pls_golite062009
  • protein domain specific binding
  • 0.30840185305841 bayes_pls_golite062009
  • active transmembrane transporter activity
  • 0.252733105474942 bayes_pls_golite062009
  • structural constituent of cytoskeleton
  • 0.182094987832726 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.82

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle