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Protein Overview: H2BFS

General Information:
Name(s) found: H2BFS [HGNC (HUGO)]
Description(s) found:
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  • gi|9973351|sp|P57053.2|H2BFS_HUMAN RecName: Full=Histone H2B type F-S; Short=H2B.s; Short=H2B/s [NCBI NR]
  • gi|7768756|dbj|BAA95538.1| H2BFS [Homo sapiens] [NCBI NR]
  • gi|56377667|dbj|BAD74065.1| histone protein [Homo sapiens] [NCBI NR]
  • gi|119629892|gb|EAX09487.1| H2B histone family, member S [Homo sapiens] [NCBI NR]
  • gi|116497035|gb|AAI26340.1| H2B histone family, member S [Homo sapiens] [NCBI NR]
  • gi|11036646|ref|NP_059141.1| H2B histone family, member S [Homo sapiens] [NCBI NR]
  • H2B histone family, member S [HGNC (HUGO)]
  • Histone H2B type F-S OS=Homo sapiens GN=H2BFS PE=1 SV=2 [Swiss-Prot]
  • H2BFS [Homo sapiens]gi|11036646|ref|NP_059141.1| H2B histone family, member S [Homo sapiens]gi|9973351|sp|P57053|H2BS_HUMAN Histone H2B.s (H2B/s) [nrdb_11152004_Chlamydomonas]
  • Histone H2B.s (H2B/s) [Yateslab_human_na_07-28-2006_reversed.fasta]
  • (NM_017445) H2B histone family, member S [Homo sapiens] [NCBI-RefSeq_human-mouse-rat_na_10-18-2006_con_reversed.fasta]
  • H2BFS [Homo sapiens] [NCBI-RefSeq_human_na_05-03-2007_con_reversed.fasta]
  • Tax_Id=9606 H2B histone family, member S [EBI-IPI_human_3.04_03-07-2005_reverse.fasta]
  • H2B histone family, member S [Homo sapiens] [HumanGallus06162005.fasta]
  • Histone H2B type F-S (H2B.s) (H2B/s) [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • histone protein [Homo sapiens] [NCBI-RefSeq_human_na_08-16-2008_con_reversed.fasta]
  • unnamed protein product [Homo sapiens] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • RecName: Full=Histone H2B type F-S; Short=H2B.s; Short=H2B/s [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • Tax_Id=9606 Gene_Symbol=H2BFS Histone H2B type F-S [human-ipi-250309-contam.fasta]
  • H2BFS protein [Homo sapiens] [nr-271106-contam.fasta]
  • IPI:IPI00477495.3|SWISS-PROT:P57053|H-INV:HIT000388931 Tax_Id=9606 Gene_Symbol=H2BFS Histone H2B type F-S [ipi.HUMAN.fasta.20090807]
  • Tax_Id=9606 Histone H2B type F-S [IPI_human_3.26.fasta]
  • P57053;A0AVF9;Q5R2W0; RecName: Full=Histone H2B type F-S; AltName: Full=Histone H2B.s; [UniProt_Human_2010_06_06-01-2010_reversed.fasta]
  • Histone H2B type F-S OS=Homo sapiens GN=H2BFS [011711_HMR.fasta]
  • Histone H2B type F-S GN=H2BFS [Doctor+uniprot-HUMAN-120911.fasta]
    • Organism: Homo sapiens
    Length: 126 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEPAKSAPA PKKGSKKAVT KAQKKDGRKR KRSRKESYSV YVYKVLKQVH PDTGISSKAM  60
   61 GIMNSFVNDI FERIAGEASR LPHYNKRSTI TSREIQTAVR LLLPGELAKH AVSEGTKAVT 120
  121 KYTSAK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run gi|14317902, gi|... No Comments Cheeseman, I.M., et al. (2004)
    View Run MIS12 No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..126] PSI-BLAST 48.522879 Crystal structure of human nucleosome core particle

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • general RNA polymerase II transcription factor activity
    		•  4.55755973084136 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  3.08569852262714 bayes_pls_golite062009
  • binding
    		•  2.69789412293579 bayes_pls_golite062009
  • histone binding
    		•  1.94956167709008 bayes_pls_golite062009
  • protein binding
    		•  1.2861218811362 bayes_pls_golite062009
  • chromatin binding
    		•  1.20812624406559 bayes_pls_golite062009
  • DNA binding
    		•  1.12213200843227 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.11168501368799 bayes_pls_golite062009
  • centromeric DNA binding
    		•  1.03586371237592 bayes_pls_golite062009
  • transcription factor binding
    		•  0.88619366665208 bayes_pls_golite062009
  • transcription cofactor activity
    		•  0.77271826645526 bayes_pls_golite062009
  • transcription initiation factor activity
    		•  0.725138319268162 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.332480599938169 bayes_pls_golite062009
  • receptor binding
    		•  0.037520339590055 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle