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Protein Overview: RPL6

General Information:
Name(s) found: RPL6 [HGNC (HUGO)]
Description(s) found:
Found 41 descriptions.
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  • ribosomal protein L6 [HGNC (HUGO)]
    • Organism: Homo sapiens
    Length: 288 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGEKVEKPD TKEKKPEAKK VDAGGKVKKG NLKAKKPKKG KPHCSRNPVL VRGIGRYSRS  60
   61 AMYSRKAMYK RKYSAAKSKV EKKKKEKVLA TVTKPVGGDK NGGTRVVKLR KMPRYYPTED 120
  121 VPRKLLSHGK KPFSQHVRKL RASITPGTIL IILTGRHRGK RVVFLKQLAS GLLLVTGPLV 180
  181 LNRVPLRRTH QKFVIATSTK IDISNVKIPK HLTDAYFKKK KLRKPRHQEG EIFDTEKEKY 240
  241 EITEQRKIDQ KAVDSQILPK IKAIPQLQGY LRSVFALTNG IYPHKLVF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MIS12 No Comments Cheeseman, I.M., et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] Pfam 30.920819 No description for PF03868.6 was found. No confident structure predictions are available.
    2 View Details [125..229] PSI-BLAST 4.045757 No description for 2joyA was found.
    3 View Details [230..288] MSA 3.056995 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • structural constituent of ribosome
    		•  9.75663213016935 bayes_pls_golite062009
  • structural molecule activity
    		•  9.17485893013108 bayes_pls_golite062009
  • translation elongation factor activity
    		•  2.80478779442574 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.61378960730317 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.37728600449241 bayes_pls_golite062009
  • DNA binding
    		•  1.96482107461071 bayes_pls_golite062009
  • binding
    		•  1.64219262839972 bayes_pls_golite062009
  • RNA binding
    		•  1.4457902513736 bayes_pls_golite062009
  • transcription factor activity
    		•  1.22903201558409 bayes_pls_golite062009
  • transcription elongation regulator activity
    		•  0.44970112534522 bayes_pls_golite062009
  • translation regulator activity
    		•  0.20179424040045 bayes_pls_golite062009
  • protein binding
    		•  0.196068293929372 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  0.177099375659271 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.44

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle