Protein: | RPL6 |
Organism: | Homo sapiens |
Length: | 288 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPL6.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..288] | [1..288] |
|
0.0 | [1..288] | [1..288] |
|
0.0 | [1..288] | [1..288] |
|
0.0 | [1..288] | [1..288] |
|
0.0 | [1..288] | [1..297] |
Region A: Residues: [1-124] |
1 11 21 31 41 51 | | | | | | 1 MAGEKVEKPD TKEKKPEAKK VDAGGKVKKG NLKAKKPKKG KPHCSRNPVL VRGIGRYSRS 60 61 AMYSRKAMYK RKYSAAKSKV EKKKKEKVLA TVTKPVGGDK NGGTRVVKLR KMPRYYPTED 120 121 VPRK |
Detection Method: | ![]() |
Confidence: | 30.920819 |
Match: | PF03868.6 |
Description: | No description for PF03868.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [125-229] |
1 11 21 31 41 51 | | | | | | 1 LLSHGKKPFS QHVRKLRASI TPGTILIILT GRHRGKRVVF LKQLASGLLL VTGPLVLNRV 60 61 PLRRTHQKFV IATSTKIDIS NVKIPKHLTD AYFKKKKLRK PRHQE |
Detection Method: | ![]() |
Confidence: | 4.045757 |
Match: | 2joyA |
Description: | No description for 2joyA was found. |
Term | Confidence | Notes |
structural constituent of ribosome | 9.75663213016935 | bayes_pls_golite062009 |
structural molecule activity | 9.17485893013108 | bayes_pls_golite062009 |
translation elongation factor activity | 2.80478779442574 | bayes_pls_golite062009 |
transcription regulator activity | 2.61378960730317 | bayes_pls_golite062009 |
nucleic acid binding | 2.37728600449241 | bayes_pls_golite062009 |
DNA binding | 1.96482107461071 | bayes_pls_golite062009 |
binding | 1.64219262839972 | bayes_pls_golite062009 |
RNA binding | 1.4457902513736 | bayes_pls_golite062009 |
transcription factor activity | 1.22903201558409 | bayes_pls_golite062009 |
transcription elongation regulator activity | 0.44970112534522 | bayes_pls_golite062009 |
translation regulator activity | 0.20179424040045 | bayes_pls_golite062009 |
protein binding | 0.196068293929372 | bayes_pls_golite062009 |
translation factor activity, nucleic acid binding | 0.177099375659271 | bayes_pls_golite062009 |
Region A: Residues: [230-288] |
1 11 21 31 41 51 | | | | | | 1 GEIFDTEKEK YEITEQRKID QKAVDSQILP KIKAIPQLQG YLRSVFALTN GIYPHKLVF |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.