| Protein: | RPL6 |
| Organism: | Homo sapiens |
| Length: | 288 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPL6.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..288] | [1..288] |
|
|
0.0 | [1..288] | [1..288] |
|
|
0.0 | [1..288] | [1..288] |
|
|
0.0 | [1..288] | [1..288] |
|
|
0.0 | [1..288] | [1..297] |
|
Region A: Residues: [1-124] |
1 11 21 31 41 51
| | | | | |
1 MAGEKVEKPD TKEKKPEAKK VDAGGKVKKG NLKAKKPKKG KPHCSRNPVL VRGIGRYSRS 60
61 AMYSRKAMYK RKYSAAKSKV EKKKKEKVLA TVTKPVGGDK NGGTRVVKLR KMPRYYPTED 120
121 VPRK
|
| Detection Method: |  |
| Confidence: | 30.920819 |
| Match: | PF03868.6 |
| Description: | No description for PF03868.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [125-229] |
1 11 21 31 41 51
| | | | | |
1 LLSHGKKPFS QHVRKLRASI TPGTILIILT GRHRGKRVVF LKQLASGLLL VTGPLVLNRV 60
61 PLRRTHQKFV IATSTKIDIS NVKIPKHLTD AYFKKKKLRK PRHQE
|
| Detection Method: | |
| Confidence: | 4.045757 |
| Match: | 2joyA |
| Description: | No description for 2joyA was found. |
| Term | Confidence | Notes |
| structural constituent of ribosome | 9.75663213016935 | bayes_pls_golite062009 |
| structural molecule activity | 9.17485893013108 | bayes_pls_golite062009 |
| translation elongation factor activity | 2.80478779442574 | bayes_pls_golite062009 |
| transcription regulator activity | 2.61378960730317 | bayes_pls_golite062009 |
| nucleic acid binding | 2.37728600449241 | bayes_pls_golite062009 |
| DNA binding | 1.96482107461071 | bayes_pls_golite062009 |
| binding | 1.64219262839972 | bayes_pls_golite062009 |
| RNA binding | 1.4457902513736 | bayes_pls_golite062009 |
| transcription factor activity | 1.22903201558409 | bayes_pls_golite062009 |
| transcription elongation regulator activity | 0.44970112534522 | bayes_pls_golite062009 |
| translation regulator activity | 0.20179424040045 | bayes_pls_golite062009 |
| protein binding | 0.196068293929372 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.177099375659271 | bayes_pls_golite062009 |
|
Region A: Residues: [230-288] |
1 11 21 31 41 51
| | | | | |
1 GEIFDTEKEK YEITEQRKID QKAVDSQILP KIKAIPQLQG YLRSVFALTN GIYPHKLVF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
