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Protein Overview: gi|108706881, gi...

General Information:
Name(s) found: gi|222624474 [NCBI NR]
gi|215713590 [NCBI NR]
gi|115451601 [NCBI NR]
gi|113547872 [NCBI NR]
gi|108706881 [NCBI NR]
Description(s) found:
Found 7 descriptions.
SHOW ALL
  • gi|222624474|gb|EEE58606.1| hypothetical protein OsJ_09944 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215713590|dbj|BAG94727.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115451601|ref|NP_001049401.1| Os03g0219400 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113547872|dbj|BAF11315.1| Os03g0219400 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108706881|gb|ABF94676.1| Glycosyl hydrolase family 20, catalytic domain containing protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 605 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALPAYLLL LLLILVILRP AAAPGAASQP PTSEPHLPPP LLAQKVQVWP KPTSISWPSA  60
   61 VYAPLSPSFS VRAVLSHPSL RQAVAFYTRL IRAERHAPLV PPANYTLSRV PVRTLTLSVS 120
  121 DPDVPLGPAV DESYTLSVLP DSGSADISAA TPWGAIRGLE TFSQLAWAGG GAASGGQPIV 180
  181 PSGIEISDRP HFTHRGILLD TARNFYPVRD ILHTLRAMAF NKLNVFHWHI TDAQSFPIVL 240
  241 PTVPNLANSG SYSPTMRYTE NDVRHIVSFA ASFGIRVIPE IDMPGHTGSW AGAYPEIVTC 300
  301 ANRFWAPHAE PALAAEPGTG QLNPLNPKTY RVAQDVLRDM VALFPDPYLH GGADEVNTAC 360
  361 WEDDPVVRRF LAEGGTHDHL LELFINATRP FVAQELNRTV VYWEDVLLGP KVTVGPTILP 420
  421 RETTILQTWN DGPENTKRVV AAGYRAIVSS ASYYYLDCGH GGWVGNDSRY DKQEKEREGT 480
  481 PLFNDPGGTG GSWCAPFKTW QRVYDYDILH GLTDDEAQLV LGGEVALWSE QSDETVLDAR 540
  541 LWPRAAAAAE TLWSGNKGSN GKKRYANATD RLNDWRHRMV ERGIRAEPIQ PLWCSLHPGM 600
  601 CNLSQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..605] PSI-BLAST 140.0 Human beta-Hexosaminidase B

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  6.26329339735894 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  5.92180849080637 bayes_pls_golite062009
  • galactosidase activity
    		•  5.29959220339307 bayes_pls_golite062009
  • hyalurononglucosaminidase activity
    		•  5.08011231554191 bayes_pls_golite062009
  • alpha-galactosidase activity
    		•  4.85819791163713 bayes_pls_golite062009
  • hexosaminidase activity
    		•  4.40461026870613 bayes_pls_golite062009
  • chitinase activity
    		•  4.33501251780389 bayes_pls_golite062009
  • hydrolase activity
    		•  3.5336140444552 bayes_pls_golite062009
  • beta-N-acetylhexosaminidase activity
    		•  2.69072465526737 bayes_pls_golite062009
  • catalytic activity
    		•  1.85569074294201 bayes_pls_golite062009
  • glucosidase activity
    		•  1.85545420386612 bayes_pls_golite062009
  • alpha-glucosidase activity
    		•  1.00973231642658 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.934517587656668 bayes_pls_golite062009
  • signal transducer activity
    		•  0.934517587656668 bayes_pls_golite062009
  • transporter activity
    		•  0.882190348056302 bayes_pls_golite062009
  • binding
    		•  0.800444849784015 bayes_pls_golite062009
  • amylase activity
    		•  0.748967897302847 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.696239852087965 bayes_pls_golite062009
  • beta-glucuronidase activity
    		•  0.55376725638834 bayes_pls_golite062009
  • sugar binding
    		•  0.52048704356718 bayes_pls_golite062009
  • receptor binding
    		•  0.497417763506343 bayes_pls_golite062009
  • beta-N-acetylglucosaminidase activity
    		•  0.489832278458081 bayes_pls_golite062009
  • mannosidase activity
    		•  0.48536369022293 bayes_pls_golite062009
  • mannose binding
    		•  0.397700317467734 bayes_pls_golite062009
  • chitin binding
    		•  0.290997030673469 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  0.266938437560648 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.223550370855368 bayes_pls_golite062009
  • carbohydrate binding
    		•  0.102788238231918 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  7.36798954279472E-5 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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