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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|108706881, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALPAYLLL LLLILVILRP AAAPGAASQP PTSEPHLPPP LLAQKVQVWP KPTSISWPSA  60
   61 VYAPLSPSFS VRAVLSHPSL RQAVAFYTRL IRAERHAPLV PPANYTLSRV PVRTLTLSVS 120
  121 DPDVPLGPAV DESYTLSVLP DSGSADISAA TPWGAIRGLE TFSQLAWAGG GAASGGQPIV 180
  181 PSGIEISDRP HFTHRGILLD TARNFYPVRD ILHTLRAMAF NKLNVFHWHI TDAQSFPIVL 240
  241 PTVPNLANSG SYSPTMRYTE NDVRHIVSFA ASFGIRVIPE IDMPGHTGSW AGAYPEIVTC 300
  301 ANRFWAPHAE PALAAEPGTG QLNPLNPKTY RVAQDVLRDM VALFPDPYLH GGADEVNTAC 360
  361 WEDDPVVRRF LAEGGTHDHL LELFINATRP FVAQELNRTV VYWEDVLLGP KVTVGPTILP 420
  421 RETTILQTWN DGPENTKRVV AAGYRAIVSS ASYYYLDCGH GGWVGNDSRY DKQEKEREGT 480
  481 PLFNDPGGTG GSWCAPFKTW QRVYDYDILH GLTDDEAQLV LGGEVALWSE QSDETVLDAR 540
  541 LWPRAAAAAE TLWSGNKGSN GKKRYANATD RLNDWRHRMV ERGIRAEPIQ PLWCSLHPGM 600
  601 CNLSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle