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Protein Overview: gi|222624418, gi...

General Information:
Name(s) found: gi|222624418 [NCBI NR]
gi|115451447 [NCBI NR]
gi|113547795 [NCBI NR]
gi|108706763 [NCBI NR]
Description(s) found:
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  • gi|222624418|gb|EEE58550.1| hypothetical protein OsJ_09850 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115451447|ref|NP_001049324.1| Os03g0207200 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113547795|dbj|BAF11238.1| Os03g0207200 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108706763|gb|ABF94558.1| expressed protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • Os03g0207200 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • expressed protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 364 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSFDRWEK DPFFPAAEEV QGSADRMESV YRIWVQDRSG GDSEAAAAAA AAAVGGGGLP  60
   61 AGELRRELHT ALGTAKWQLD ELERAIRSND KVFSAGKDTK ARHDDFVAAI GCRILEVENN 120
  121 LKESNVAEGR GALSWIDLDE DERNDLATFL SASSFQQRDK VVTIPSVGDI DVGNNAAMVK 180
  181 KDMYADSSKD SGSAELSSAR VKEETHRGHR RAASAHADIG SWTMLCPNES ESSADLPYDD 240
  241 KHQEPLLKIV KTCALTSALQ SKPRTKKKGG SVKWAAVDQQ DVEETIPLSS QMGQGSDRCF 300
  301 ERSKSCVSTC DESTYNKKLY GCLGALHRRL QRSRYRIRYG RPVQLIVLAV AALLIFMCVF 360
  361 KKIW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..125] PSI-BLAST 32.154902 Syntaxin 6, SNAP-25 homolog
    2 View Details [126..219] PSI-BLAST 15.221849 No description for 2npsD was found.
    3 View Details [220..364] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.068037611730119 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle