| Protein: | gi|222624418, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 364 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222624418, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
365.0 | [0..1] | [344..1] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MATSFDRWEK DPFFPAAEEV QGSADRMESV YRIWVQDRSG GDSEAAAAAA AAAVGGGGLP 60
61 AGELRRELHT ALGTAKWQLD ELERAIRSND KVFSAGKDTK ARHDDFVAAI GCRILEVENN 120
121 LKESN
|
| Detection Method: |  |
| Confidence: | 32.154902 |
| Match: | 1lvfA |
| Description: | Syntaxin 6, SNAP-25 homolog |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.068037611730119 | bayes_pls_golite062009 |
|
Region A: Residues: [126-219] |
1 11 21 31 41 51
| | | | | |
1 VAEGRGALSW IDLDEDERND LATFLSASSF QQRDKVVTIP SVGDIDVGNN AAMVKKDMYA 60
61 DSSKDSGSAE LSSARVKEET HRGHRRAASA HADI
|
| Detection Method: | |
| Confidence: | 15.221849 |
| Match: | 2npsD |
| Description: | No description for 2npsD was found. |
|
Region A: Residues: [220-364] |
1 11 21 31 41 51
| | | | | |
1 GSWTMLCPNE SESSADLPYD DKHQEPLLKI VKTCALTSAL QSKPRTKKKG GSVKWAAVDQ 60
61 QDVEETIPLS SQMGQGSDRC FERSKSCVST CDESTYNKKL YGCLGALHRR LQRSRYRIRY 120
121 GRPVQLIVLA VAALLIFMCV FKKIW
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
