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Protein Overview: gi|78708275, gi|...

General Information:
Name(s) found: gi|78708275 [NCBI NR]
gi|215704713 [NCBI NR]
gi|115481588 [NCBI NR]
gi|113638996 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|78708275|gb|ABB47250.1| expressed protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|215704713|dbj|BAG94741.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115481588|ref|NP_001064387.1| Os10g0343100 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113638996|dbj|BAF26301.1| Os10g0343100 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 367 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSFDRWEK DPFFPAAEEV QESADRMESV YRRWLQERKE VGGGAVETAA ERGGGGWGRA  60
   61 AGDLRRELHT ALGTAKWQLD ELQRAIKSNY SVVLAGKDTR ARHDDFVSAI GHRILEVEKF 120
  121 LKESNTTEGR GPLSWVRLDE GEREELAHFL SAGTYQKRDE VVTITSAGDI EVGSNARRVK 180
  181 KGVSIDSSND SSGSAESGLV STKEETAPGH RRTASAYADI GSWTITIPDE ANGIDEQSFD 240
  241 DLPKVPLVKS PSSSVLMNAF QSKTRMKTKN GAKKLAGADQ QDVVETLPLT NSRSCQGFDG 300
  301 LFQRSKSCLS TSDDEDNCNK KLYGCLGAFR RLLQRSQYQV QYGRPIQLLI LAIVVLLVLI 360
  361 YAMKAIL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..125] PSI-BLAST 32.0 Syntaxin 6, SNAP-25 homolog
    2 View Details [126..220] PSI-BLAST 9.0 No description for 2npsD was found.
    3 View Details [221..367] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.068037611730119 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle