| Protein: | gi|78708275, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 367 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|78708275, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
411.0 | [0..1] | [366..1] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MATSFDRWEK DPFFPAAEEV QESADRMESV YRRWLQERKE VGGGAVETAA ERGGGGWGRA 60
61 AGDLRRELHT ALGTAKWQLD ELQRAIKSNY SVVLAGKDTR ARHDDFVSAI GHRILEVEKF 120
121 LKESN
|
| Detection Method: |  |
| Confidence: | 32.0 |
| Match: | 1lvfA |
| Description: | Syntaxin 6, SNAP-25 homolog |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.068037611730119 | bayes_pls_golite062009 |
|
Region A: Residues: [126-220] |
1 11 21 31 41 51
| | | | | |
1 TTEGRGPLSW VRLDEGEREE LAHFLSAGTY QKRDEVVTIT SAGDIEVGSN ARRVKKGVSI 60
61 DSSNDSSGSA ESGLVSTKEE TAPGHRRTAS AYADI
|
| Detection Method: | |
| Confidence: | 9.0 |
| Match: | 2npsD |
| Description: | No description for 2npsD was found. |
|
Region A: Residues: [221-367] |
1 11 21 31 41 51
| | | | | |
1 GSWTITIPDE ANGIDEQSFD DLPKVPLVKS PSSSVLMNAF QSKTRMKTKN GAKKLAGADQ 60
61 QDVVETLPLT NSRSCQGFDG LFQRSKSCLS TSDDEDNCNK KLYGCLGAFR RLLQRSQYQV 120
121 QYGRPIQLLI LAIVVLLVLI YAMKAIL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
