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Protein Overview: gi|109500260

General Information:
Name(s) found: gi|109500260 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|109500260|ref|XP_001060403.1| PREDICTED: similar to WD repeat and FYVE domain containing 3 isoform 2 [Rattus norvegicus] [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 3525 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [UNKNOWN]
    cytoplasm [UNKNOWN]
    cytoplasmic part [UNKNOWN]
    extrinsic to membrane [UNKNOWN]
    autophagic vacuole [UNKNOWN]
    Biological Process: NONE FOUND
    Molecular Function: beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity [UNKNOWN]
    zinc ion binding [IEA]
    binding [IEA]
    phosphatidylinositol binding [UNKNOWN]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMVKRIMGR PRQEECSPQD NALGLMHLRR LFTELCHPPR HMTQKEQEEK LYMMLPVFNR  60
   61 VFGNAPPSTM TEKFSDLLQF TTQVSRLMVT EIRRRASNKS TEAASRAIVQ FLEINQSEEA 120
  121 SRGWMLLTTI NLLASSGQKA VDCMTTMSVP STLVKCLYLF FDLPHVPEAG GGAQSELPLA 180
  181 ERRGLLQKAF VQILVKLCSF VSPAEELAQK DDLQLLFSAI TSWCPPYNLP WRKSAGEVLM 240
  241 TISRHGLSVN VVKYIHEKEC LSTCVQNMQQ SDDLSPLEIV EMFAGLSCFL KDSSDVSQTL 300
  301 LDDFRIWQGY NFLCDLLLKL EQAKEAECRD ALKDLVSLVT SLTTYGVSEL KPAGVTTGAP 360
  361 FLLPGFSVPQ PAGKGHSVRN IQAFAVLQNA FLKAKTNFLA QIILDAITDI YMADSANYFI 420
  421 LESQHTLSQF AEKISKLPEV QSKYFEMLEF VVFSLNYIPC KELISVSILL KSSSSHHCSI 480
  481 VAMKTLLKFT RHDYIFKDVF REVGLLEVMV NLLHKYAALL KDPAQALGEQ GDSRNNSSVE 540
  541 DQKHLALLVM EALTVLLQGS NTNAGIFREF GGARCAHNIV KYPQCRQHAL MTIQQLVLSP 600
  601 NGEDDMGTLL GLMHSAPPTE LQLKTDILRA LLSVLRESHR SRTVFRKVGG FVYITSLLVA 660
  661 MERSLSSPPK NGWEKVNQNQ VFELLHTVFC TLTAALRYEP ANSHFFKTEI QYEKLADAVR 720
  721 FLGCFSDLRK ISAVNVFPSN TSPFQRLLEE GAVPMDSVSP TLRHCSKLFI YLYKVATDSF 780
  781 DSRTEQIPPC LTSESSLPSP WGTPALSRKR HAFHCVSTPP VYPAKSVTDL KLQVTSSPLP 840
  841 SSEAVIIHPG AMLAMLDLLA SVGSVTQPEH ALDLQLAVAN ILQSLVHTER NQQVMCEAGL 900
  901 HARLLQRCGA ALADEDHSLH PPLQRMFERL ASQALEPMVL REFLRLASPL NCGAWDKKLL 960
  961 KQYRVHKPSS LSFEPDMRSS VVTSLEGLGS DSVFSSHEDN HYRISKSLVK SAEGSTVPLT1020
 1021 RVKCLVSMTT PHDIRLHGSS VTPAFVEFDT SLEGFGCLFL PSLAPHNAPT NNAVTTGLTD1080
 1081 GAVVSGIGSG ERFFPPPSGL SYSCWFCIEH FSSPPNNHPV RLLTVVRRAN SSEQHYVCLA1140
 1141 IVLSAKDRSL IVSTKEELLQ NYVDDFSEES SFYEILPCCA RFRCGELVVE GQWHHLALLM1200
 1201 SRGMLKNSTA ALYIDGQLVS TVKLHYVHST PGGSGSANPP VLSTVYAYIG TPPAQRQMAS1260
 1261 LVWRLGPTHF LEEVLPPSSV TAIYELGPDY VGSFQAVLVP CKDSKSEGII PSPVSLVAEE1320
 1321 KVSFGLYALS VSSLTVARIR KVYNKLDSKA IAKQLGISSH ENATPVKLVH NAAGHLNGPA1380
 1381 RTIGAALIGY LGVRTFVPKP VATTLQYIGG AAAILGLVAM ASDVEGLYAA VKALVCVVKS1440
 1441 NPLASKEMER IKGYQLLAML LKKRRSLLNS HILHLTFSLV GTVDSGHETS IIPNSTAFQD1500
 1501 LLCDFEVWLH APYELHLSLF EHFIELLTES SEASKNAKLM REFQLIPKLL LTLRDMSLSQ1560
 1561 PTIAAMSNVL SHLLQGFPNS NDLLRFGQFI SSTLPTFAVC EKFVVMEIIN EGKPDSGAEE1620
 1621 EFGGLVSANL ILLRNRLLDI LLKLVYTSKE KTNINLQACE ELVRTLGFDW IMMFMEEHLH1680
 1681 PTTVTAAMRI LVVLLSNQSI LIKFKEGLSG GGWLEQTDSV LTNKIGTVLG FNVGRSAGGR1740
 1741 STVREINRDA CHFPGFLVLQ SFLPKHTNVP ALYFLLMALF LQQPVSELPE NLQVSVPVTN1800
 1801 SRCKQGCQFD LDSIWTFIFG VPASSGTVVS SIHNVCTESA FLLLGMLRSM LNSPWQSEEE1860
 1861 GSWLREYPVT LMQFFRYLYH NVPDLASMWL SPDFLCALAA TVFPFNIRPY SEMVTDLDDE1920
 1921 VGSPAEEFKA FAADTGMNRS QSEYCNVGTK TYLTNHPAKK FVFDFMRVLI IDNLCLTPAS1980
 1981 KQTPLIDLLL EASPERSTRT QQKEFQTHIL DSVMDHLLAA DVLLGEDASL PITSGGSYQV2040
 2041 LVNNVFYFTQ RVVDKLWQGM FNKESKLLID FIIQLIAQSK RRSQGLSLDA VYHCLNRTIL2100
 2101 YQFSRAHKTV PQQVALLDSL RVLTVNRNLI LGPGNHDQEF ISCLAHCLIN LHAGSSVEGF2160
 2161 GLEAEARMTT WHIMIPSDIE PDGGYSQDIS EGRQLLIKAV NRVWTELIHS KKQVLEEVFK2220
 2221 VSLPVNDRGH VDIAVARPLI EEAGLKGWQN HLAHEKKCIS RGEALVPTTQ SKLSRVSSGF2280
 2281 GLSKLTGSRR NRKESGLHKH SPSPQEISQW MFTHIAVVRD LVDTQYKEYQ ERQQNALKYV2340
 2341 TEEWCQIECE LLRERGLWGP PIGSHLDKWM LEMTEGPCRM RKKMVRNDMF YNHYPYVPET2400
 2401 EQEASVGSEI PSKQPEPPDD VTAQKKPARY RRAISYDSKE YYLRLASGNP TIVQDAIVES2460
 2461 SEGEATQQEP EHGEDTIAKV KGLVKPPLKR SRSAPDGGDE ETQEQLQDQI AESGSIEEEE2520
 2521 KTDNATLLRL LEEGEKIQHM YRCARVQGLD TSEGLLLFGK EHFYVIDGFT MTATREIRDI2580
 2581 ETLPPNMHEP IIPRGARQGP SQLKRTCSIF AYEDIKEVHK RRYLLQPIAV EVFSGDGRNY2640
 2641 LLAFQKGIRN KVYQRFLAVV PSLTDSSESV SGQRPNTSVE QGSGLLSTLV GEKSVTQRWE2700
 2701 RGEISNFQYL MHLNTLAGRS YNDLMQYPVF PWILADYDSE EVDLTNPKTF RNLAKPMGAQ2760
 2761 TDERLAQYKK RYKDWEDPNG ETPAYHYGTH YSSAMIVASY LVRMEPFTQI FLRLQGGHFD2820
 2821 LADRMFHSVR EAWYSASKHN MADVKELIPE FFYLPEFLFN SNNFDLGCKQ NGTKLGDVIL2880
 2881 PPWAKGDPRE FIRVHREALE CDYVSAHLHE WIDLIFGYKQ QGPAAVEAVN VFHHLFYEGQ2940
 2941 VDIYNINDPL KETATIGFIN NFGQIPKQLF KKPHPPKRVR SRLNGENAGL SVPPGATSDK3000
 3001 IFFHHLDNLR PSLTPVKELK EPVGQIVCTD KGILAVEQNK VLIPPAWNKT FAWGYADLSC3060
 3061 RLGTYESDKA VAVYECLSEW GQILCAVCPS PKLVITGGTS TVVCVWEMGT SKEKAKPLTL3120
 3121 KQALLGHTDT VTCATASIAY HIIVSGSRDR TCIIWDLNKL SFLTQLRGHR APVSALCINE3180
 3181 LTGDIVSCAG TYVHVWSING NPIVSVNTFT GRSQQIVCCC MSEMNEWDTQ NVIVTGHSDG3240
 3241 VVRFWRMEFL QVPETPAPEP VEDLEMQEGC PEAQIGQQAQ DEDSSDSEAE EPSVSQDPKD3300
 3301 TPSQPSSTSH RPRAASCRAT ATWCTDSGSD DSRRWSDQLS LDEKDGFIFV NYSEGQARAH3360
 3361 PQGSHSHPNP TEARSYSRLK PGYRWERQLV FRSKLTMHTA FDRKDNTHPA EVTALGVSKD3420
 3421 HSRILVGDSR GRVFSWSVSD QPGRSAADHW VKDEGGDSCS GCSVRFSLTE RRHHCRNCGQ3480
 3481 LFCQKCSRFQ SEIKRLKISS PVRVCQNCYY SLQHERGADD GPRNC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle