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Protein Overview: gi|109473827, gi...

General Information:
Name(s) found: gi|109473827 [NCBI NR]
gi|109472292 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|109473827|ref|XP_001074073.1| PREDICTED: similar to Alstrom syndrome 1 [Rattus norvegicus] [NCBI NR]
  • gi|109472292|ref|XP_216189.3| PREDICTED: similar to Alstrom syndrome 1 [Rattus norvegicus] [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 3215 amino acids

    Gene Ontology:
    Cellular Component: centrosome [UNKNOWN]
    cytosol [UNKNOWN]
    cellular_component [ND]
    Biological Process: biological_process [ND]
    spermatid development [UNKNOWN]
    triglyceride metabolic process [UNKNOWN]
    fat cell differentiation [UNKNOWN]
    regulation of fat cell differentiation [UNKNOWN]
    developmental growth [UNKNOWN]
    cholesterol homeostasis [UNKNOWN]
    retinal rod cell development [UNKNOWN]
    sensory perception of sound [UNKNOWN]
    epithelial cell proliferation [UNKNOWN]
    lipid metabolic process [UNKNOWN]
    apoptosis [UNKNOWN]
    cilium assembly [UNKNOWN]
    glucose homeostasis [UNKNOWN]
    calcium-mediated signaling [UNKNOWN]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPEDLPWPD ELEEEEEEEE EEGKEEAENA SAAATEEART SEETGRLEEE ELEGAGPEVD  60
   61 LDFNSESQLQ ESTDEEEDEL AKAWLQAHPD RPGQGFSLTP PPTPPPSSRH QYRPVEHWGK 120
  121 REVIPLTYRA WQQTSYQDNA RAQFSNSSTL LLEPEFQWDP EEVQRTESWH HLPQERDSFQ 180
  181 TLNISQTGID RVEGAEVKDL PSQEGGESVQ AQCPVKEPKL DLLCSPLLVI QDDFAAPDLP 240
  241 LLTCMTQDQE FEPDSLFQQS ELEFAPLRGI PDKSEDIEWL ARPSEVSEAL IQATSESSSD 300
  301 LVNSCFSISQ HPLTEGLQGK AKSDVLILFG DAKYASIYEN AGAHSERITE LQREVDCSNL 360
  361 SITQAFPSSL PSFVPQEPTI ESEYHSSNLR MLRVSPDTLL TTLTQTTGSV DQKIGAAAIS 420
  421 SPYSHGVQPG SFPQEELPDR HLTEEIRKVS PAPRPAGQKP EMPTVPSSSY SKGIKSVFYR 480
  481 YPMSYSPQGK EPPNVSSVSG SAENALPLTV TSVSQPQRET AKAFYQQTLS DSLLTAETLP 540
  541 VSVIPESGDQ KTHLLSGFSL SYSHRGEDLP EDVVKVSTDS GSVDKKADIP TVSSSTYQHK 600
  601 TKPGIIYYQE FPDSHVPIGT RKVVSQSGAA GQKTDLSAVP STSSSQAEKP VPPSLLTLLG 660
  661 SHLPEDVFKA SYVCKSSEEP SGITALTSVS YSYKGRPNIS HQEKFPDSYL IEEAQKILGS 720
  721 TVTVDQKTVT AKEKPSVFYQ QALPEGGLSA EDLQVDQNIA IPMVTSASFS QREKPQVFYQ 780
  781 EALSGGHLPG EPPGPPDQNT EAPTISPSSY FPGEESIIFY QAGFPGNTPS VVPFKVSRIS 840
  841 ELAEQKTNIT TGPSGSYSVG EKSIIFYHQA LPDGHLSKEA SPAPADLKTG EPPVYSASCS 900
  901 VEVKPIIFYQ QPLSDSPLTK GHNVSVVPGP TDQKTGIPAV PSTSQSYIER RSVSYQQEFP 960
  961 NVSEKALKVL GGVRSTEQKT EIPVVSSALL HTEVPTISSQ EDLPNLTEEA LQILGVAEEV1020
 1021 PSVPSRDKTR LISYQKKLPD GTEVSLKSVG FGSTDQKTGA HIVSSSRREK SSGFHQQELP1080
 1081 NTCGDALGTF HPEPVAQKAL KVSDGSACVA QMPEAPAGPS IFYFHKERFS NYQKASPDCD1140
 1141 LTENSLKSST VPGLSDQKKR PPVSSGSCSH KEKHKISAAD LLDAQAAELP TVIQRSCLHR1200
 1201 EKLAISTVIK PDDPKIPLPT TCHASCAQKV KPVIFVQKQL SGRDQSEDIP KISTVSEPTV1260
 1261 ANTGAPVLLS SSYPYREKSD FSSPKELPDR HPAKVDMQAS SSLGQADQIS RLPTVPPGTY1320
 1321 SHSEKYQLIS EHVQELIDNL NSSESCLNAD IMMPSNSQID DGVIICKPES SRFANVGCEE1380
 1381 IQDIDHGSKT LKEIQTLLME AENMALKRCN FSVPLVPFRD VSDVSFVQSK KVVCFKETPT1440
 1441 SDVCIQKDSF AEEVPHTKYV QKDIGTQTNL KYQRNVRNWE FISSATFRSP LHEANGTARV1500
 1501 AFDENFRQYR ATRSVMRSEP EDCSTGIGDK IIIPMMTIIK SDSSSDVSDG CCSWDNNLPE1560
 1561 SLESVSDVFL NFFPYTSPKT SITDSREEEG LSESEDGYGS ADSLAAHVKY LLQCESSLNQ1620
 1621 AKQILKNAEE EEYRVRAQAW NLKFNLGRDY GYPVSELNED DRRKVEEIKA KLFGHGRTTH1680
 1681 VSEVLQSPRG IGCLPEAVCG HIIIESHEKG CYRTLTAEQP RPDSCHCVFR SVDPSDLIRG1740
 1741 HRSPSSWRGR HINLSRSIDQ SNPHFKIGNS FQLQSHPPFE KLVPDDIKIS KGVGMPFHEH1800
 1801 MDPQPSELIE PTCVPAKEMD FSSSSEILPS EPKKQFTTSI TFSSHQHSKC ISDSSGFKVD1860
 1861 VTAGSQCTGP SLGVFKPHIP EEQISPRDLK QKISSPSSLQ RHSYTPVTIL VDSSRQRQKL1920
 1921 PVDFEHSNQK GKLLQRSAFN FSHSEPSVST NVSFKGVQFS GNDTIVRQDK LISTVEVKEK1980
 1981 NVTLTPDLPS CIFLEQGEES HTPHTDLHMR KCPSPSGLDI ASCIFLEQHK FFEQSQGQHV2040
 2041 DDHEMREDYS LFPKCQGYIA ADPSDFPDQQ QCKPPGVDGH VRKQHYPLSP VQDCEVEEVQ2100
 2101 CIPQSYFSNM VNVEAKVSDM VSPDAPDHFT AASTPPSSRK ALSCVRITLC PKTPSKLDSG2160
 2161 TLDERFHSLD PASKTRINSE FNSDLRIISS RSLEPTSKLL TCKPVAQDQE SLVFLGPKSP2220
 2221 LDLQVAESSL PDSKTISQDL KTTPPQNSQI VTSRQTQVNI SDLEEYSKPE GTPVPADGSQ2280
 2281 EQNKAPFTTS SGMLSSDAVT QVTTESPEKM TFSSEIFINA DDRGQDIPYP TTQNPSRFAS2340
 2341 SSSGQQITAS QGKDAQPVLL PYKPSGSSKM YYVPLLKPVP SYLDSKSDTT VESSHSGSND2400
 2401 AIAPDFPPQV LGTRDDDLST TVNIKHKEGI YSKRAASKGK QPSQKGNAEA PVQMPVTWDK2460
 2461 NVYKENQDEI ISRRVVIETA GPEEMPSQEK DLAGSSDITV QDRKTGNLPD AKSIKQKEGS2520
 2521 LEIEPECHSE FANTTHSVFR SASFYFHHPV HLPQEQDLCR ESSGRNVLTQ HPWKDLFHCH2580
 2581 SGHSGLPPPG PRSDNTEMEC TRVKSLSMDL NLGGHEKIHT IKNQARDTKE DKRPANDPKK2640
 2641 DQKVTPELTS QCPMSLNELW NKYQERQKQQ KPSGACDNKE LSLVERLDRL AKLLQNPITH2700
 2701 SLQASESTQD DRRWGRGARG WTGRRQHQQK GKQQRKWSKS LERGHSTGDF RKSKVLSPHE2760
 2761 GGKSSQRNIE KIKLDKYILR KQPDFNNVSN TSLDSRPSEE SELLLTDSPN LFSSTESPVE2820
 2821 SDVLTHTGRD MPLNERSSSI STVDTARLIQ AFGHDRLYLS PRQIKLYSSV TNQRRKHLEK2880
 2881 PCKHKRKALN TACPQMTSEH TRRRHVQVAN RIMSSDSVSS AGSCLSLDST LSNEENVHML2940
 2941 NKGVQAGNLE IVTGAKKYTQ DVGVTFPTPS SSEARLEEDS DMTSWSEEKA KEKKFLSNYL3000
 3001 RGKNLRKNKP NPCEGVSWFV PVENRKSESK KENLPKIYRP AISWFEPVTQ TKPWREPLRE3060
 3061 QNWQAQCMNS RGSLGGPGRD SGQSFLQPFV RATLQESLQL HRPDFISRSG ERIKRLKLLV3120
 3121 QERKLQNLFQ NEREALFNTA RPLPRRVLLA VQKNKPIGKT EMIRRTRRFY EQLPEVKKKR3180
 3181 EEEKRKSEYT SYRLRAQHYK MKVTNHLLGR KVPWD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle