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Protein Overview: gi|113611702, gi...

General Information:
Name(s) found: gi|125600936 [NCBI NR]
gi|115473135 [NCBI NR]
gi|113611702 [NCBI NR]
Description(s) found:
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  • gi|125600936|gb|EAZ40512.1| hypothetical protein OsJ_023995 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|115473135|ref|NP_001060166.1| Os07g0593400 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113611702|dbj|BAF22080.1| Os07g0593400 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • Os07g0593400 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 372 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEDAPSAAA AEGSQHASAA EGGSAAAAAS AAPAAKAAEA LLPSLSIWPP SQRTRDAVVR  60
   61 RLVQTLVAPS ILSQRYGAVP EAEAGRAAAA VEAEAYAAVT ESSSAAAAPA SVEDGIEVLQ 120
  121 AYSKEVSRRL LELAKSRAAP SPAAAAPAEG AASESEAAAA PAPAEDCYVV LNGIPVISAM 180
  181 FFHKCELMIK QDNCIFALAI PLTAVVTSVT VTARVEVELS GGWDEIGLGL SGFGVLFSFL 240
  241 GIIMLFDKGF LAIGNILFVS GVSLTIGPKS TVQFFTKPKN HKGSIAFGIG FFLVLIGWPF 300
  301 FGMLAEAYGF VKLFRGFWPT AAVYLQKSPT FGWIFHHPLV TSVQGKTSPG VIVALLLELD 360
  361 HSKGCRVTSK ET

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..198] MSA 36.049997 View MSA. No confident structure predictions are available.
    2 View Details [199..372] Pfam 49.522879 No description for PF04178.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle