Protein Overview: gi|119571719, gi...

General Information:
Name(s) found:	gi\|8923909 [NCBI NR] gi\|8572221 [NCBI NR] gi\|20521800 [NCBI NR] gi\|119571719 [NCBI NR]
Description(s) found: Found 24 descriptions. SHOW ALL	gi\|8923909\|ref\|NP_061165.1\| ERBB2 interacting protein isoform 2 [Homo sapiens] [NCBI NR] gi\|8572221\|gb\|AAF77048.1\|AF263744_1 erbb2-interacting protein ERBIN [Homo sapiens] [NCBI NR] gi\|20521800\|dbj\|BAA86539.2\| KIAA1225 protein [Homo sapiens] [NCBI NR] gi\|119571719\|gb\|EAW51334.1\| erbb2 interacting protein, isoform CRA_c [Homo sapiens] [NCBI NR]
Organism:	Homo sapiens
Length:	1371 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTKRSLFVR LVPCRCLRGE EETVTTLDYS HCSLEQVPKE IFTFEKTLEE LYLDANQIEE  60
   61 LPKQLFNCQS LHKLSLPDND LTTLPASIAN LINLRELDVS KNGIQEFPEN IKNCKVLTIV 120
  121 EASVNPISKL PDGFSQLLNL TQLYLNDAFL EFLPANFGRL TKLQILELRE NQLKMLPKTM 180
  181 NRLTQLERLD LGSNEFTEVP EVLEQLSGLK EFWMDANRLT FIPGFIGSLK QLTYLDVSKN 240
  241 NIEMVEEGIS TCENLQDLLL SSNSLQQLPE TIGSLKNITT LKIDENQLMY LPDSIGGLIS 300
  301 VEELDCSFNE VEALPSSIGQ LTNLRTFAAD HNYLQQLPPE IGSWKNITVL FLHSNKLETL 360
  361 PEEMGDMQKL KVINLSDNRL KNLPFSFTKL QQLTAMWLSD NQSKPLIPLQ KETDSETQKM 420
  421 VLTNYMFPQQ PRTEDVMFIS DNESFNPSLW EEQRKQRAQV AFECDEDKDE REAPPREGNL 480
  481 KRYPTPYPDE LKNMVKTVQT IVHRLKDEET NEDSGRDLKP HEDQQDINKD VGVKTSESTT 540
  541 TVKSKVDERE KYMIGNSVQK ISEPEAEISP GSLPVTANMK ASENLKHIVN HDDVFEESEE 600
  601 LSSDEEMKMA EMRPPLIETS INQPKVVALS NNKKDDTKET DSLSDEVTHN SNQNNSNCSS 660
  661 PSRMSDSVSL NTDSSQDTSL CSPVKQTHID INSKIRQEDE NFNSLLQNGD ILNSSTEEKF 720
  721 KAHDKKDFNL PEYDLNVEER LVLIEKSVDS TATADDTHKL DHINMNLNKL ITNDTFQPEI 780
  781 MERSKTQDIV LGTSFLSINS KEETEHLENG NKYPNLESVN KVNGHSEETS QSPNRTEPHD 840
  841 SDCSVDLGIS KSTEDLSPQK SGPVGSVVKS HSITNMEIGG LKIYDILSDN GPQQPSTTVK 900
  901 ITSAVDGKNI VRSKSATLLY DQPLQVFTGS SSSSDLISGT KAIFKFDSNH NPEEPNIIRG 960
  961 PTSGPQSAPQ IYGPPQYNIQ YSSSAAVKDT LWHSKQNPQI DHASFPPQLL PRSESTENQS1020
 1021 YAKHSANMNF SNHNNVRANT AYHLHQRLGP ARHGEMWAIS PNDRLIPAVT RSTIQRQSSV1080
 1081 SSTASVNLGD PGSTRRAQIP EGDYLSYREF HSAGRTPPMM PGSQRPLSAR TYSIDGPNAS1140
 1141 RPQSARPSIN EIPERTMSVS DFNYSRTSPS KRPNARVGSE HSLLDPPGKS KVPRDWREQV1200
 1201 LRHIEAKKLE KMPLSNGQMG QPLRPQANYS QIHHPPQASV ARHPSREQLI DYLMLKVAHQ1260
 1261 PPYTQPHCSP RQGHELAKQE IRVRVEKDPE LGFSISGGVG GRGNPFRPDD DGIFVTRVQP1320
 1321 EGPASKLLQP GDKIIQANGY SFINIEHGQA VSLLKTFQNT VELIIVREVS S

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	gi\|14317902, gi\|...	No Comments	Cheeseman, I.M., et al. (2004)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

No functions predicted.

Term	Confidence	Notes
cytoskeletal protein binding	3.60106431937699	bayes_pls_golite062009
structural constituent of muscle	3.42559406638725	bayes_pls_golite062009
binding	3.2595117613307	bayes_pls_golite062009
actinin binding	2.8541265463155	bayes_pls_golite062009
protein binding	2.35875654816667	bayes_pls_golite062009
receptor binding	2.21437757568292	bayes_pls_golite062009
actin binding	2.13642404399707	bayes_pls_golite062009
alpha-actinin binding	1.19161788092692	bayes_pls_golite062009
transporter activity	1.18978519116375	bayes_pls_golite062009
transmembrane transporter activity	1.07211582292329	bayes_pls_golite062009
signal transducer activity	1.06018756723145	bayes_pls_golite062009
molecular transducer activity	1.06018756723145	bayes_pls_golite062009
PDZ domain binding	0.87883331498113	bayes_pls_golite062009
growth factor activity	0.761026127092133	bayes_pls_golite062009
substrate-specific transporter activity	0.755223974149211	bayes_pls_golite062009
protein domain specific binding	0.64214865642772	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	0.549085929250683	bayes_pls_golite062009
beta-catenin binding	0.451508822778631	bayes_pls_golite062009
actin filament binding	0.395248867755308	bayes_pls_golite062009
transcription regulator activity	0.387065538161985	bayes_pls_golite062009
active transmembrane transporter activity	0.252733105474942	bayes_pls_golite062009
structural constituent of cytoskeleton	0.182094987832726	bayes_pls_golite062009

No functions predicted.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.76

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..571]	PSI-BLAST	46.69897	Human Toll-like Receptor 3 extracellular domain structure
2	View Details	[572..712]	deduced	N/A	No confident structure predictions are available.
3	View Details	[713..842]	PSI-BLAST	3.154902	mRNA export factor tap
4	View Details	[843..995]	deduced	N/A	No confident structure predictions are available.
5	View Details	[996..1128]	PSI-BLAST	13.0	Solution Structure of The forth PDZ Domain of Human Atrophin-1 Interacting Protein 1 (KIAA0705 Protein)
6	View Details	[1129..1276]	deduced	N/A	No confident structure predictions are available.
7	View Details	[1277..1371]	PSI-BLAST	31.221849	Erbin

Protein Overview: gi|119571719, gi...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: