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Protein Overview: CE39680

General Information:
Name(s) found: CE39680 [WormBase]
Description(s) found:
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  • WBGene00016201 locus:tdo-2 status:Confirmed UniProt:Q27GU8 protein_id:CCD65974.1 [WormBase]
  • gi|89179579|gb|ABD63242.1| Hypothetical protein C28H8.11c [Caenorhabditis elegans] [NCBI NR]
  • gi|115532664|ref|NP_001040847.1| hypothetical protein C28H8.11 [Caenorhabditis elegans] [NCBI NR]
  • CE39680 WBGene00016201 status:Confirmed UniProt:Q27GU8_CAEEL protein_id:ABD63242.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE39680 WBGene00016201 status:Confirmed UniProt:Q27GU8_CAEEL protein_id:ABD63242.1| [wormORF-contam.fasta]
  • CE39680 WBGene00016201 status:Confirmed TR:Q27GU8 protein_id:ABD63242.1 [wormpep160-contam.fasta]
  • Hypothetical protein C28H8.11c [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • C28H8.11c [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE39680 WBGene00016201 status:Confirmed UniProt:Q27GU8 protein_id:ABD63242.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE39680 WBGene00016201 status:Confirmed UniProt:Q27GU8 protein_id:CCD65974.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE39680 WBGene00016201 locus:tdo-2 status:Confirmed UniProt:Q27GU8 protein_id:CCD65974.1 [wormbase_c_elegans_ws234_and_mcherry_10-06-2012_reversed.fasta]
  • CE39680 WBGene00016201 locus:tdo-2 status:Confirmed UniProt:Q09474 protein_id:CCD65974.1 Tryptophan 2,3-dioxygenase [c_elegans-PRJNA13758-WS250-ecoli-contam.fasta]
  • Isoform of Q09474, Isoform C of Tryptophan 2,3-dioxygenase OS=Caenorhabditis elegans GN=tdo-2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 112 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: positive regulation of growth rate [IMPLink to PubMed article]
    tryptophan metabolic process [IEALink to PubMed article]
    Molecular Function: tryptophan 2,3-dioxygenase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMIYFYRDMP RFSQPYQILT FLMDIDSLFT KWRYNHVLLV QRMLGAKQGT GGSSGYMYLR  60
   61 STVSDRYKVF LDLFNLSTWL IPREYIPMLS PRMVKTLSEH SNLSHSQSSE SD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] PSI-BLAST 25.30103 No description for 2nw7A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle