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Protein Overview: nhr-11

General Information:
Name(s) found: nhr-11 / CE40175 [WormBase]
Description(s) found:
Found 10 descriptions.
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  • WBGene00003610 locus:nhr-11 status:Partially_confirmed UniProt:Q23294 protein_id:CAJ90499.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 394 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: regulation of transcription, DNA-dependent [IEALink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    steroid hormone receptor activity [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLNTHFCIS TIIVRSKREN FACTRRKDSR NNSDAAPNSN SPSTRQSSSP EEMDDWSFQM  60
   61 FEEKPKIEDL PLTPSISHPP LPTQLMPEES SRTSSFDGGY CSSYPSSSAA THPSPPGMLY 120
  121 SIENNSILQY YHSMETGLCS KRRIMYTNTG MDFILDTHAN LQCPFTVNDL RPHDYRNFRG 180
  181 MLRHDFVMLF DYATRFPEFN SFTSHEKNMF YRQIVAVDFI LSSAYYTAKL GQAHRQMVLT 240
  241 NGEYLNMDPL PMSGNEIDAR RYFDCDEDFS KYRALMPMHI AIWEESIVPF SKLNVTFEEF 300
  301 CLLKALTVWQ ATYFKLTENG REKCRRQRNI IIGFLSKMCH SPGGGGEHRV GELLMSMNYL 360
  361 RESAQKLTTS YVMLTVFNVL NCDSMLHEML NFQY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] PSI-BLAST 4.522879 No description for 2hanB was found.
    2 View Details [81..394] PSI-BLAST 53.69897 LIGAND-BINDING DOMAIN OF THE HUMAN NUCLEAR RECEPTOR RXR-ALPHA


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle