| Protein: | nhr-11 |
| Organism: | Caenorhabditis elegans |
| Length: | 394 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nhr-11.
| Description | E-value | Query Range |
Subject Range |
|
|
234.0 | [0..2] | [394..158] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MKLNTHFCIS TIIVRSKREN FACTRRKDSR NNSDAAPNSN SPSTRQSSSP EEMDDWSFQM 60
61 FEEKPKIEDL PLTPSISHPP
|
| Detection Method: |  |
| Confidence: | 4.522879 |
| Match: | 2hanB |
| Description: | No description for 2hanB was found. |
|
Region A: Residues: [81-394] |
1 11 21 31 41 51
| | | | | |
1 LPTQLMPEES SRTSSFDGGY CSSYPSSSAA THPSPPGMLY SIENNSILQY YHSMETGLCS 60
61 KRRIMYTNTG MDFILDTHAN LQCPFTVNDL RPHDYRNFRG MLRHDFVMLF DYATRFPEFN 120
121 SFTSHEKNMF YRQIVAVDFI LSSAYYTAKL GQAHRQMVLT NGEYLNMDPL PMSGNEIDAR 180
181 RYFDCDEDFS KYRALMPMHI AIWEESIVPF SKLNVTFEEF CLLKALTVWQ ATYFKLTENG 240
241 REKCRRQRNI IIGFLSKMCH SPGGGGEHRV GELLMSMNYL RESAQKLTTS YVMLTVFNVL 300
301 NCDSMLHEML NFQY
|
| Detection Method: | |
| Confidence: | 53.69897 |
| Match: | 1lbdA |
| Description: | LIGAND-BINDING DOMAIN OF THE HUMAN NUCLEAR RECEPTOR RXR-ALPHA |
Matching Structure (courtesy of the PDB): |
|
