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Protein Overview: kcnl-1

General Information:
Name(s) found: kcnl-1 / CE39663 [WormBase]
Description(s) found:
Found 14 descriptions.
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  • WBGene00007176 locus:kcnl-1 status:Confirmed UniProt:G5EER9 protein_id:CAJ76928.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 680 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: potassium ion transport [IEALink to PubMed article]
    Molecular Function: calcium-activated potassium channel activity [IEALink to PubMed article]
    calmodulin binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQKKSSGER RRRSELTNGH SVPNNRKTSC QVVGAPRRST LAPGSTALMA LSQFDSRRFS  60
   61 TIDGPIALRR QSTKRRVIKS DPKQIIHIFT NPYDRYVNGG VRFDNDVIEE GTASGAASGG 120
  121 VGTPKKIAGF RRRQSGYGIA ISSDSTAKMR CRLRKQLFIR RNKVCDISLF LAVLGLLLVI 180
  181 IDSELTALSS STGITKDSPI SIILRSACVV STFFLICCLI NYHAIEVKIA LIDSGADDWR 240
  241 VAFSTDRFIK MLIEVCVCMI CPFPEIFSDG LMKMPYINAD TRQVKMRDVP IDVLLSVPMF 300
  301 LRSYLVCRFM VLHSKQFQDA ATRSIAALNR ISMDFRFVIK TMMADHPLRV LIVFTLSYWM 360
  361 CMSWMFTQCE RYDGQLEVEH YYLNSMWFIM VTFMSIGYGD IVPNTYCGRC LSITTGIVGA 420
  421 GVSSALIAII SRKLELSRAE KHVNNFMADS KLTNQRKNAA ASVLQETWFI HKYKKALHKG 480
  481 DDLRLRHHQR RFLHSINEFR RIKWDQRKLQ EKGNSLLDVG KLHSDMHETL WEMHRTQDHF 540
  541 ISQIDVLTQK IMELQMTLNT RPPCCAPPTS SSNDAYFSTS TQLGTVLPTV IPTIPLPPTQ 600
  601 SPMLHASQSH REPLQVTTTT TTSSDGLPRI SVGSTSSTAT SASSGNGSLP QCTVDQLSNC 660
  661 PTGGIYATVT TPLISNFEEV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..499] PSI-BLAST 55.39794 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    2 View Details [500..680] MSA 1.612989 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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