YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: RNG1B_ARATH

General Information:
Name(s) found: RNG1B_ARATH [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
SHOW ALL
  • Putative E3 ubiquitin-protein ligase RING1b OS=Arabidopsis thaliana GN=RING1B PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 460 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    PRC1 complex [IPI]
    Biological Process: negative regulation of gene expression, epigenetic [IGI]
    Molecular Function: zinc ion binding [IEA][ISS]
    protein binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLKSFSAA EEEDDQLGRN SEAERFNPEA VEKEEDPDKM DEKDESGDEE DDVKRDQVEA  60
   61 EDEEALGEEE DSKERSQSSS AGELSESEYM VVDLADICKD VQCSICLGII RKTRTVMECL 120
  121 HRFCRECIDK SMRLGNNECP TCRKHCASRR SLRDDPNFDA LIAALFKNID KFEEEELNFR 180
  181 QDDEARNKQI QASIAQVSQR QSKALVKRKS VGKGTAILSR SRRSGGGSRR RRNCRNIEQD 240
  241 TSEANDDDDQ NKRGKDSSSD EPCERQRKKR SATQPSSSNA NNNDNCAGNG TEQTHQRDSR 300
  301 VISPVLVWNS ELIAWGRGGT RSNTRQGNNN QGAISKRNAR LKRLVEYLGS LEGNSVELDI 360
  361 HLKLVSLDTE GLLNLHEPYL CFRPTLLVKQ LREYVARHLK LKAEEVELLV SKDGDTVIGN 420
  421 KTSTEKMQSL QDDETVAKLK VDCISSNGYM IVVYRRKQIA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..56] MSA 1.118996 View MSA. No confident structure predictions are available.
    2 View Details [57..215] PSI-BLAST 11.522879 No description for 2cklB was found.
    3 View Details [216..376] MSA 1.523996 View MSA. No confident structure predictions are available.
    4 View Details [377..460] PSI-BLAST 13.522879 No description for 2iwgB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle