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View Structure Prediction Details

Protein: RNG1B_ARATH
Organism: Arabidopsis thaliana
Length: 460 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for RNG1B_ARATH.

Predicted Domain #1
Region A:
Residues: [1-56]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSLKSFSAA EEEDDQLGRN SEAERFNPEA VEKEEDPDKM DEKDESGDEE DDVKRD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [57-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QVEAEDEEAL GEEEDSKERS QSSSAGELSE SEYMVVDLAD ICKDVQCSIC LGIIRKTRTV  60
   61 MECLHRFCRE CIDKSMRLGN NECPTCRKHC ASRRSLRDDP NFDALIAALF KNIDKFEEEE 120
  121 LNFRQDDEAR NKQIQASIAQ VSQRQSKALV KRKSVGKGT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.522879
Match: 2cklB
Description: No description for 2cklB was found.

Predicted Domain #3
Region A:
Residues: [216-376]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AILSRSRRSG GGSRRRRNCR NIEQDTSEAN DDDDQNKRGK DSSSDEPCER QRKKRSATQP  60
   61 SSSNANNNDN CAGNGTEQTH QRDSRVISPV LVWNSELIAW GRGGTRSNTR QGNNNQGAIS 120
  121 KRNARLKRLV EYLGSLEGNS VELDIHLKLV SLDTEGLLNL H

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [377-460]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPYLCFRPTL LVKQLREYVA RHLKLKAEEV ELLVSKDGDT VIGNKTSTEK MQSLQDDETV  60
   61 AKLKVDCISS NGYMIVVYRR KQIA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 13.522879
Match: 2iwgB
Description: No description for 2iwgB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle