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Protein Overview: SEC23IP

General Information:
Name(s) found: SEC23IP [HGNC (HUGO)]
Description(s) found:
Found 29 descriptions.
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  • SEC23 interacting protein [HGNC (HUGO)]
    • Organism: Homo sapiens
    Length: 1000 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAERKPNGGS GGASTSSSGT NLLFSSSATE FSFNVPFIPV TQASASPASL LLPGEDSTDV  60
   61 GEEDSFLGQT SIHTSAPQTF SYFSQVSSSS DPFGNIGQSP LTTAATSVGQ SGFPKPLTAL 120
  121 PFTTGSQDVS NAFSPSISKA QPGAPPSSLM GINSYLPSQP SSLPPSYFGN QPQGIPQPGY 180
  181 NPYRHTPGSS RANPYIAPPQ LQQCQTPGPP AHPPPSGPPV QMYQMPPGSL PPVPSSVQSP 240
  241 AQQQVPARPG APSVQVPSPF LLQNQYEPVQ PHWFYCKEVE YKQLWMPFSV FDSLNLEEIY 300
  301 NSVQPDPESV VLGTDGGRYD VYLYDRIRKA AYWEEEPAEV RRCTWFYKGD TDSRFIPYTE 360
  361 EFSEKLEAEY KKAVTTNQWH RRLEFPSGET IVMHNPKVIV QFQPSSVPDE WGTTQDGQTR 420
  421 PRVVKRGIDD NLDEIPDGEM PQVDHLVFVV HGIGPVCDLR FRSIIECVDD FRVVSLKLLR 480
  481 THFKKSLDDG KVSRVEFLPV HWHSSLGGDA TGVDRNIKKI TLPSIGRFRH FTNETLLDIL 540
  541 FYNSPTYCQT IVEKVGMEIN HLHALFMSRN PDFKGGVSVA GHSLGSLILF DILSNQKDLN 600
  601 LSKCPGPLAV ANGVVKQLHF QEKQMPEEPK LTLDESYDLV VENKEVLTLQ ETLEALSLSE 660
  661 YFSTFEKEKI DMESLLMCTV DDLKEMGIPL GPRKKIANFV EHKAAKLKKA ASEKKAVAAT 720
  721 STKGQEQSAQ KTKDMASLPS ESNEPKRKLP VGACVSSVCV NYESFEVGAG QVSVAYNSLD 780
  781 FEPEIFFALG SPIAMFLTIR GVDRIDENYS LPTCKGFFNI YHPLDPVAYR LEPMIVPDLD 840
  841 LKAVLIPHHK GRKRLHLELK ESLSRMGSDL KQGFISSLKS AWQTLNEFAR AHTSSTQLQE 900
  901 ELEKVANQIK EEEEKQVVEA EKVVESPDFS KDEDYLGKVG MLNGGRRIDY VLQEKPIESF 960
  961 NEYLFALQSH LCYWESEDTA LLLLKEIYRT MNISPEQPQH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..374] PSI-BLAST 9.69897 No description for 1y0fA was found.
    2 View Details [375..459] PSI-BLAST 9.522879 Solution structure of kinase associated domain 1 of mouse MAP/microtubule affinity-regulating kinase 3
    3 View Details [460..621] FFAS03 0.961 No description for 2czqA was found.
    4 View Details [622..706] PSI-BLAST 7.522879 Crystal Structure of the native Shank SAM domain.
    5 View Details [707..823] deduced N/A No confident structure predictions are available.
    6 View Details [824..1000] MSA 3.039944 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.62955416667198 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  0.948847910276381 bayes_pls_golite062009
  • protein binding
    		•  0.911727732150777 bayes_pls_golite062009
  • catalytic activity
    		•  0.293538501560182 bayes_pls_golite062009
  • ATP binding
    		•  0.26935413682411 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.240660657655502 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.236006384312529 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.234121269075782 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.230186899198459 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.230144903720081 bayes_pls_golite062009
  • nucleotide binding
    		•  0.226056374465577 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.0736099081095881 bayes_pls_golite062009
  • kinase activity
    		•  0.0280132346880262 bayes_pls_golite062009
  • protein kinase activity
    		•  0.016719885205046 bayes_pls_golite062009
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  2.53905184151408 bayes_pls_golite062009
  • protein binding
    		•  2.33652613087799 bayes_pls_golite062009
    5 No functions predicted.
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle