Protein Overview: gi|48145659, gi|...

General Information:
Name(s) found:	gi\|631470 [NCBI NR] gi\|55958546 [NCBI NR] gi\|48145659 [NCBI NR] gi\|197692481 [NCBI NR] gi\|197692227 [NCBI NR] gi\|158256108 [NCBI NR] gi\|14165439 [NCBI NR] gi\|14165437 [NCBI NR] gi\|12653175 [NCBI NR] gi\|119583081 [NCBI NR]
Description(s) found: Found 40 descriptions. SHOW ALL	pir\|\|S43363 transformation upregulated nuclear protein - human [NCBI NR] gi\|55958546\|emb\|CAI16021.1\| heterogeneous nuclear ribonucleoprotein K [Homo sapiens] [NCBI NR] gi\|48145659\|emb\|CAG33052.1\| HNRPK [Homo sapiens] [NCBI NR] gi\|197692481\|dbj\|BAG70204.1\| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens] [NCBI NR] gi\|197692227\|dbj\|BAG70077.1\| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens] [NCBI NR] gi\|158256108\|dbj\|BAF84025.1\| unnamed protein product [Homo sapiens] [NCBI NR] gi\|14165439\|ref\|NP_002131.2\| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens] [NCBI NR] gi\|14165437\|ref\|NP_112553.1\| heterogeneous nuclear ribonucleoprotein K isoform a [Homo sapiens] [NCBI NR] gi\|12653175\|gb\|AAH00355.1\| Heterogeneous nuclear ribonucleoprotein K [Homo sapiens] [NCBI NR] gi\|119583081\|gb\|EAW62677.1\| heterogeneous nuclear ribonucleoprotein K, isoform CRA_c [Homo sapiens] [NCBI NR]
Organism:	Homo sapiens
Length:	464 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METEQPEETF PNTETNGEFG KRPAEDMEEE QAFKRSRNTD EMVELRILLQ SKNAGAVIGK  60
   61 GGKNIKALRT DYNASVSVPD SSGPERILSI SADIETIGEI LKKIIPTLEE GLQLPSPTAT 120
  121 SQLPLESDAV ECLNYQHYKG SDFDCELRLL IHQSLAGGII GVKGAKIKEL RENTQTTIKL 180
  181 FQECCPHSTD RVVLIGGKPD RVVECIKIIL DLISESPIKG RAQPYDPNFY DETYDYGGFT 240
  241 MMFDDRRGRP VGFPMRGRGG FDRMPPGRGG RPMPPSRRDY DDMSPRRGPP PPPPGRGGRG 300
  301 GSRARNLPLP PPPPPRGGDL MAYDRRGRPG DRYDGMVGFS ADETWDSAID TWSPSEWQMA 360
  361 YEPQGGSGYD YSYAGGRGSY GDLGGPIITT QVTIPKDLAG SIIGKGGQRI KQIRHESGAS 420
  421 IKIDEPLEGS EDRIITITGT QDQIQNAQYL LQNSVKQYAD VEGF

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	None Entered	Sample pIC145 from april 2005	Okada, M., et al. (2006)
View Run	gi\|14317902, gi\|...	No Comments	Cheeseman, I.M., et al. (2004)
View Run	MIS12	No Comments	Cheeseman, I.M., et al. (2004)

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

No functions predicted.

Term	Confidence	Notes
RNA binding	6.35205331138538	bayes_pls_golite062009
mRNA binding	4.67566555881601	bayes_pls_golite062009
nucleic acid binding	3.42924343218473	bayes_pls_golite062009
binding	3.31439627344982	bayes_pls_golite062009
	2.82262844310386	bayes_pls_golite062009
poly-pyrimidine tract binding	1.75736205236351	bayes_pls_golite062009
transcription regulator activity	1.42352554448586	bayes_pls_golite062009
DNA binding	1.19165437089346	bayes_pls_golite062009
protein binding	1.09698608157472	bayes_pls_golite062009
single-stranded RNA binding	0.795008427109843	bayes_pls_golite062009
transcription factor activity	0.392247064645943	bayes_pls_golite062009
structure-specific DNA binding	0.158813798830905	bayes_pls_golite062009
catalytic activity	0.1435046019283	bayes_pls_golite062009
mRNA 3'-UTR binding	0.137373295657998	bayes_pls_golite062009

Term	Confidence	Notes
RNA binding	6.76415077523249	bayes_pls_golite062009
mRNA binding	5.07455187994216	bayes_pls_golite062009
nucleic acid binding	3.68444148122352	bayes_pls_golite062009
binding	3.45962790790935	bayes_pls_golite062009
	2.87067043110488	bayes_pls_golite062009
poly-pyrimidine tract binding	2.05765562493656	bayes_pls_golite062009
transcription regulator activity	1.43703138180882	bayes_pls_golite062009
DNA binding	1.20852534725468	bayes_pls_golite062009
protein binding	1.16541072642796	bayes_pls_golite062009
single-stranded RNA binding	0.981003625136521	bayes_pls_golite062009
mRNA 3'-UTR binding	0.489176583045793	bayes_pls_golite062009
transcription factor activity	0.386248501195543	bayes_pls_golite062009
structure-specific DNA binding	0.32222928997178	bayes_pls_golite062009
catalytic activity	0.113112541746059	bayes_pls_golite062009
single-stranded DNA binding	0.1069917291606	bayes_pls_golite062009

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..99]	PSI-BLAST	23.522879	No description for 2annA was found.
2	View Details	[100..384]	FFAS03	2.99	Far upstream binding element, FBP, KH3 and KH4 domains
3	View Details	[385..464]	PSI-BLAST	14.69897	HnRNP K, KH3

Protein Overview: gi|48145659, gi|...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: