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Protein Overview: RBS1

General Information:
Name(s) found: RBS1 / YDL189W [SGD]
Description(s) found:
Found 8 descriptions.
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  • Protein of unknown function, identified as a high copy suppressor of psk1 psk2 mutations that confer temperature-sensitivity for galactose utilization; proposed to bind single-stranded nucleic acids via its R3H domain [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 488 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: galactose metabolic process [IGILink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVSLSVSSF FHIQLDKFWR RQLSHIVPAS RGDTLDSRNW GLTPAMETGL FQKPQDRIFI  60
   61 IELENSIVSF INSNTESFQL RPMNSYYRLL SHQIAEYHNL NHVLARTQDS CVILFKGENF 120
  121 QKIEGKPLLQ ELQLNKKPEE CASSSESIEK SNNNRIFRIL KRKEVGNECD YKIDGNTRTP 180
  181 NSNLTANSNK DQKIEIDDKS STDLEQERIE KERLYEQRKQ EIFDKLNKSE DDVKSTNSSG 240
  241 SSDSDNEWSD WLNGDDSNTQ TSNGSVSSSS PFNSSVTTIQ VNKPQQQFYD SRRGRGGRRR 300
  301 GTNNYKDAYR GQSRRNKENG GYQSGYSSPY LVYPPPQMGG NSLPTYPLMY NPAGPAPGPA 360
  361 PSPMVMGNNT VFMNPYMYNM NPQGSCSFGT PIPMYPPYQY QYQYQYNTQY HSGPYSNTPS 420
  421 YNSNNYTRSS ANKYHHFQGK NSYSGAIPKR SDDSNSNKNE GIRRASVEGS PSSRDTDSVE 480
  481 MKFDKLNI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] Pfam 12.638272 R3H domain No confident structure predictions are available.
    2 View Details [121..225] deduced N/A No confident structure predictions are available.
    3 View Details [226..488] ORFEUS 9.91 RBP1


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle