YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ASR1

General Information:
Name(s) found: ASR1 / YPR093C [SGD]
Description(s) found:
Found 10 descriptions.
SHOW ALL
  • Ubiquitin ligase that modifies and regulates RNA Pol II; involved in a putative alcohol-responsive signaling pathway; accumulates in the nucleus under alcohol stress; contains a Ring/PHD finger domain similar to the mammalian rA9 protein [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 310 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: response to ethanol [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQGVEPRERP YPQPNIQISY KKMEECPICL ADDQEGEQFG CLNVCGHKFH LNCIREWHKY  60
   61 SINLKCPICR VESTHLEVGE GQHALSINLK MGFMIKNAID YVGAETTNER NEDDTGEQDQ 120
  121 EIEFLSERLR GTLVMDTIKI IQCSICGDTD VSRLSLYCQD CEAIYHETCL RGLACEVGDR 180
  181 NTWQECTDCR SNALLELRMG AISSQLASYD SRNSMIFAGE LRDKHSVKTQ QMYEQIRNAK 240
  241 HKIQMHVRRA LDRYPLPLLR FKDAYKHVNK QVSRKLYRLS DNKYLPDQYD YDSLARTGVH 300
  301 TELLIYCHDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] PSI-BLAST 4.69897 brca1 RING domain
    2 View Details [112..170] deduced N/A No confident structure predictions are available.
    3 View Details [171..310] MSA 3.232997 View MSA. Confident ab initio structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle