YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: YAH1

General Information:
Name(s) found: YAH1 / YPL252C [SGD]
Description(s) found:
Found 26 descriptions.
SHOW ALL
  • Ferredoxin of the mitochondrial matrix required for formation of cellular iron-sulfur proteins; involved in heme A biosynthesis; homologous to human adrenodoxin [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 172 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial matrix [IDALink to PubMed article]
    Biological Process: heme a biosynthetic process [IGILink to PubMed article][IMPLink to PubMed article]
    Molecular Function: oxidoreductase activity, acting on NADH or NADPH, heme protein as acceptor [IGILink to PubMed article][IMPLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKIVTRAGH TARISNIAAH LLRTSPSLLT RTTTTTRFLP FSTSSFLNHG HLKKPKPGEE  60
   61 LKITFILKDG SQKTYEVCEG ETILDIAQGH NLDMEGACGG SCACSTCHVI VDPDYYDALP 120
  121 EPEDDENDML DLAYGLTETS RLGCQIKMSK DIDGIRVALP QMTRNVNNND FS

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Qiu et al. (2008) COX15 YAH1

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YAH1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..51] PSI-BLAST 2.522879 Flavohemoglobin, N-terminal domain; Flavohemoglobin, central domain; Flavohemoglobin, C-terminal domain
    2 View Details [52..172] PSI-BLAST 216.315398 Adrenodoxin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ferrous iron binding
    		•  1.85747866468448 bayes_pls_golite062009
  • binding
    		•  1.43854872579441 bayes_pls_golite062009
  • 2 iron, 2 sulfur cluster binding
    		•  0.64064605761447 bayes_pls_golite062009
  • iron ion binding
    		•  0.573352512627799 bayes_pls_golite062009
  • electron carrier activity
    		•  0.304665256428442 bayes_pls_golite062009
  • protein binding
    		•  0.299955399062748 bayes_pls_golite062009
  • iron-sulfur cluster binding
    		•  0.19654473978775 bayes_pls_golite062009
  • metal cluster binding
    		•  0.19654473978775 bayes_pls_golite062009
  • catalytic activity
    		•  0.105119876745552 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle